Thermofilum adornatum 1505: TCARB_1542
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Entry
TCARB_1542 CDS
T03526
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
tcb
Thermofilum adornatum 1505
Pathway
tcb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tcb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TCARB_1542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcb03021
]
TCARB_1542
Enzymes [BR:
tcb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TCARB_1542
Transcription machinery [BR:
tcb03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
TCARB_1542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
AJB42584
UniProt:
A0A3G1A9U8
LinkDB
All DBs
Position
complement(1360577..1363243)
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AA seq
888 aa
AA seq
DB search
MSTRESSKIIAGLKFGILSPEMIRKLAVLRIETSELYDDEGFPIPGGLMDRRMGSIEPGA
VCQTCGNRFTNCPGHFGYIELARPVVHPEFTPYIALLLKATCSKCGRLKLDEERIEKARK
RMEVYSRKWPSLKIKYANTLLKEAAKATECPHCHAPQYKIKVDKPYTFYEEREEGLVRLT
PLEIWERLSRIPDKDLEVVGIDPKEARPEWMVLRVVPVVPPSVRPSITLESGDRSEDDLT
HKLVDIIRVNQRLKENIDSGSPSLVIEDLWGLLQYHVATYFDNELPGIPPARHRSGRALR
TLAQRLKGKEGRFRGSLAGKRVDFSSRTVISPDPNLSINEVGVPIDVAKVLTVPEKVTSW
NIEKMRQLVINGPDVWPGANYIIKPDGSRIDLRFAKHREELSQALAPGYIVERHLMDGDI
VLFNRQPSLHRISIMAHVVRVLPYKTFRLNLLVTIPYNADFDGDEMNLHVPQSEEARAEA
RELMLVERHIMTARYGAPIIGGLHDYITGAYLLTRKDTLLDKKEALRLLYLGNNSEPLVE
PAILKPGPYWTGKQLVSMFLPKGLNYVGRASVAPSSGKCDEEYCENDGYILIKDGKLLLG
VFDKQAIGAEKHGTVLHEIVREYGVEKARELMDGMFKVFVEYLDKYGFTMGVDSVEIPPE
AERDVQEIVREAEKRVQELIEQYRSGELQPMPGKTRKETLEDLIMNVLAEARTRAGEIVS
RHLGLLNHAVIMARTGARGSMLNLTQMAAIVGQQSVRGKRIERGYSGRTLSHFPVNDLSP
QAKGFVQSSFRRGLSPEEFFFHAISGREGLVDTAVRTAQSGYMYRRLQSAMQDFYVSYDG
TVRNSEGLVIQYRYGEDGVDPSRSDHGKPVDVDKLIKKVLAMRGERHE
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgagtacacgcgagtcgtccaagataattgccgggctaaagttcggcattctctcgcca
gaaatgattaggaagctcgccgtcctaaggatagagacaagcgagctgtacgacgacgag
ggcttcccgattccaggaggtctgatggacaggaggatgggctcaatagagcctggagct
gtctgccagacgtgtggcaataggttcacgaattgtcccgggcactttggctacatcgag
ctggcccggcccgtcgtccacccagagttcaccccgtatatcgctttgctcctgaaggct
acttgtagcaagtgtggcaggcttaagctcgacgaggagcgcatagagaaggccaggaaa
aggatggaggtttattcacgcaagtggcccagcctaaagataaagtacgccaacacattg
ctaaaagaggccgcaaaggcaacggagtgcccccactgccacgccccacagtacaagatc
aaggttgacaagccctacacgttctacgaggagagggaggagggccttgtcaggctgacg
cccctagagatatgggagcgcctctcaaggatacccgacaaggacctcgaggtagtaggc
atagaccccaaggaggctaggcccgagtggatggttctaagggttgtccccgttgttcct
ccaagcgttaggccgtctatcacgctcgagtctggagaccgctcggaagacgacttgaca
cacaagcttgtcgacattatccgtgtcaaccagaggctcaaggagaacattgactctggc
tccccatccctagttatcgaggatctctggggtcttctccagtaccacgtcgcgacgtat
ttcgacaacgagcttccaggtataccgcctgctaggcacaggtctggaagggcccttagg
acccttgcacagcgtctgaaaggcaaggagggaaggtttagggggagccttgctgggaaa
cgtgtagacttctcttccaggacggtcatttctcctgaccctaacctcagcattaacgag
gtcggtgtcccgatagacgttgcaaaggtattgactgtgcccgaaaaggtcacctcctgg
aacatcgagaaaatgaggcagctcgtcattaatggccccgacgtttggccaggcgctaac
tacatcataaagccggacgggtccaggattgacctgcgattcgctaagcacagggaggag
ctcagccaggccctggcgccgggctacattgttgagaggcacctcatggacggcgacatc
gtcttgtttaacaggcagccctcgctacacaggatatcgataatggcacacgtggtgagg
gttctcccatacaagactttccgcctaaacctcctcgtaactataccctacaacgcggac
ttcgacggtgacgagatgaacctacacgtgccgcagagcgaggaggcccgggccgaggca
agggagctgatgctcgtggagagacacatcatgacggcgcgatatggggcgccgatcatc
ggtggtctacacgattatattactggggcttacctgttgactaggaaggacacgctccta
gacaagaaggaggccctaaggctgctctacctcggaaacaactctgagcccctagtcgag
ccagcgatactcaagccggggccctactggacagggaaacagctagtcagcatgtttctg
ccaaagggcctcaactatgttggacgcgcaagtgttgcaccctcttctgggaaatgtgac
gaggagtactgtgagaacgacggctacatcctgatcaaggacggcaagctcctgctagga
gtctttgataagcaggctatcggcgcagagaagcatggaaccgtcctacacgagattgta
cgtgaatacggcgtggaaaaggccagggagctaatggacggcatgtttaaggtctttgta
gagtacctcgacaagtacggcttcacgatgggtgtcgacagcgtagagatacccccagag
gcagagagggacgtgcaggaaatagtaagggaggcagaaaagagggtccaggagctcata
gagcagtacaggtctggagagctccagccgatgccgggcaagactcgtaaggagaccctc
gaggacctcataatgaatgtgctggctgaggcgaggacgagggctggagaaatagttagc
aggcaccttggactacttaaccacgcggtcataatggctaggacgggagcaaggggaagc
atgctgaacctgacacagatggccgcgattgtcggacagcagtcggttaggggcaagagg
atagagaggggctacagcggtaggacgctgtcacacttccctgtcaacgacctgtctcca
caggccaagggcttcgtccagagctctttccgcaggggcctgtccccagaagagttcttc
ttccacgcgatttctggaagagagggactggtagacacggccgttaggactgcccagtcc
ggatacatgtaccgcaggctccagagcgcaatgcaggacttctacgtgtcctacgacggc
accgtgaggaacagcgagggcctagtgatacagtacaggtacggcgaggacggcgtcgac
ccgtctaggagtgaccacgggaagccggtagacgtagacaagttgattaagaaagttctt
gcgatgaggggtgaaaggcatgagtaa
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