Thermofilum adornatum 1505: TCARB_1641
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Entry
TCARB_1641 CDS
T03526
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
tcb
Thermofilum adornatum 1505
Brite
KEGG Orthology (KO) [BR:
tcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcb03016
]
TCARB_1641
Enzymes [BR:
tcb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
TCARB_1641
Transfer RNA biogenesis [BR:
tcb03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
TCARB_1641
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GFIT
Motif
Pfam:
LigT_PEase
AKAP7_NLS
2_5_RNA_ligase2
HVSL
Motif
Other DBs
NCBI-ProteinID:
AJB42681
UniProt:
A0A3G1AA11
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All DBs
Position
complement(1461291..1461854)
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AA seq
187 aa
AA seq
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MTELIRSFIAVKIEAPETVARIGILQQDLQKSGLHAKFVETENFHLTLRFLGEIPLTTLE
TVKNRLSEVKFHPFRISLKGVGAFPAMSRPRVLWIGVEEGAEDLVSLANQVRGKLASIKL
PEPDEDFHPHLTIARLKGPLNAEARKIIDSSKDLLFGTQEIKYFALYQSILTPRGPIYKE
LMRYELS
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgactgagctcatccgtagctttatcgcggtgaaaattgaggccccagaaaccgtggca
cgcataggcattctccaacaggatctacaaaaatcaggcctccacgccaaatttgtggaa
acagaaaactttcatctcaccttaagatttctaggcgaaataccattgacaacattagaa
acagtgaaaaataggctttcagaagtcaagtttcacccgtttaggatttccctgaaaggc
gtaggcgcttttccggcaatgtcgaggccaagggttctctggataggagtagaggaagga
gcagaagatctagtatcactggcgaatcaagttagaggaaaacttgcatccataaagctc
ccagaaccagacgaggattttcacccacatcttaccattgctagactcaagggacctctc
aacgctgaggctaggaaaataattgactcctctaaagatttattattcgggacccaagaa
ataaagtattttgcgctatatcagagtatcttgacgcctaggggtccaatttacaaggag
ctaatgaggtatgagctatcctga
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