KEGG   Thermofilum adornatum 1505: TCARB_1641
Entry
TCARB_1641        CDS       T03526                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
tcb  Thermofilum adornatum 1505
Brite
KEGG Orthology (KO) [BR:tcb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tcb03016]
    TCARB_1641
Enzymes [BR:tcb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     TCARB_1641
Transfer RNA biogenesis [BR:tcb03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    TCARB_1641
SSDB
Motif
Pfam: LigT_PEase AKAP7_NLS 2_5_RNA_ligase2 HVSL
Other DBs
NCBI-ProteinID: AJB42681
UniProt: A0A3G1AA11
LinkDB
Position
complement(1461291..1461854)
AA seq 187 aa
MTELIRSFIAVKIEAPETVARIGILQQDLQKSGLHAKFVETENFHLTLRFLGEIPLTTLE
TVKNRLSEVKFHPFRISLKGVGAFPAMSRPRVLWIGVEEGAEDLVSLANQVRGKLASIKL
PEPDEDFHPHLTIARLKGPLNAEARKIIDSSKDLLFGTQEIKYFALYQSILTPRGPIYKE
LMRYELS
NT seq 564 nt   +upstreamnt  +downstreamnt
atgactgagctcatccgtagctttatcgcggtgaaaattgaggccccagaaaccgtggca
cgcataggcattctccaacaggatctacaaaaatcaggcctccacgccaaatttgtggaa
acagaaaactttcatctcaccttaagatttctaggcgaaataccattgacaacattagaa
acagtgaaaaataggctttcagaagtcaagtttcacccgtttaggatttccctgaaaggc
gtaggcgcttttccggcaatgtcgaggccaagggttctctggataggagtagaggaagga
gcagaagatctagtatcactggcgaatcaagttagaggaaaacttgcatccataaagctc
ccagaaccagacgaggattttcacccacatcttaccattgctagactcaagggacctctc
aacgctgaggctaggaaaataattgactcctctaaagatttattattcgggacccaagaa
ataaagtattttgcgctatatcagagtatcttgacgcctaggggtccaatttacaaggag
ctaatgaggtatgagctatcctga

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