Thermofilum adornatum 1505: TCARB_1772
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Entry
TCARB_1772 CDS
T03526
Name
(GenBank) RNA-binding S1 domain-containing protein
KO
K07573
exosome complex component CSL4
Organism
tcb
Thermofilum adornatum 1505
Pathway
tcb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tcb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TCARB_1772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcb03019
]
TCARB_1772
Messenger RNA biogenesis [BR:
tcb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
TCARB_1772
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
TCARB_1772
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
TackOD1
Zn_ribbon_6
Zn_ribbon_NOB1
Zn_Ribbon_YjdM
Zn_Ribbon_TF
DZR
Prok-RING_1
CopK
Motif
Other DBs
NCBI-ProteinID:
AJB42808
UniProt:
A0A3G1A8W7
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All DBs
Position
1568223..1568876
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AA seq
217 aa
AA seq
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MYTGLDSSRLIIIYMGANSLFKVVYMETPDKKQIVIPGEEIATIEEYSPGKNVFQDTGDG
LIKSKKVGRLRLDVKTHVAEVESMKTHKNVLTKNEVVYAVVERFEDPIAVLRIIYSESKK
TPIVPSVTGILHVANASNSRVRYLSDVFGYGDIVRAYVVEEGGPPFYLSTRGRQFGVIVA
KCPKCMSSMRKRGIVLYCPQCGYKTKNKKISLYYLLK
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
gtgtatacaggcctagacagtagcaggctcataataatatatatgggtgcaaattcactt
ttcaaagtggtgtatatggagaccccagacaagaagcagatagtcatacctggcgaggaa
atagcgacgatcgaggagtattctccgggaaaaaacgtgttccaagacaccggcgacggg
ctgataaagtcgaaaaaagtcggaaggctacggctcgacgtaaagacccacgttgcagaa
gtcgagagcatgaagacccacaaaaatgtacttacgaaaaacgaggttgtatacgctgtg
gtggagcggttcgaggacccaatcgccgtcttgaggatcatatattcagaaagcaaaaag
accccaatagtcccatccgtgactggcatcctgcatgtagcaaatgctagcaactcgagg
gtacgatacctttcagacgtcttcggctatggagacatagtgagggcatacgttgtagag
gagggcggcccaccgttctacctgtcgaccagggggcgacaattcggagtaatcgtggca
aagtgccctaagtgtatgtcgtccatgaggaaacgcggcatagtgctttactgcccccag
tgcggctacaagacaaagaacaagaagataagcctgtactatctcttaaagtag
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