Thermofilum adornatum 1505: TCARB_1916
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Entry
TCARB_1916 CDS
T03526
Name
(GenBank) tRNA-intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
tcb
Thermofilum adornatum 1505
Brite
KEGG Orthology (KO) [BR:
tcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcb03016
]
TCARB_1916
Enzymes [BR:
tcb01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
TCARB_1916
Transfer RNA biogenesis [BR:
tcb03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
TCARB_1916
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
AJB42952
UniProt:
A0A3G1A7G7
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All DBs
Position
complement(1708438..1708995)
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AA seq
185 aa
AA seq
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MECIKANAVLLGNRVVVLDVKEGHDLYFRGGFYGRFFTVPKPKLPDVEKELEISLFDAMY
LLEQGCLNLTNERGEPIKPSEFFSIASKLYDNFYDAYTVYKDLRNRGYVVKSGMKFGSTF
AVYQFGPGIDHSIFLVEVLKYGDKLDPIQIIRAGRLSHSVRKRFILAYRDPATNRIQYFS
FKWLM
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggaatgcattaaggccaacgctgtcctcctaggcaacagggtcgttgtacttgatgtt
aaagaggggcacgacctatactttaggggcggattctatggtagattctttactgtgccc
aagcccaagcttcccgacgtcgaaaaggaacttgaaatttcactttttgatgcaatgtac
ctcttagagcaggggtgcctaaacctaacaaacgagaggggagaaccaataaagccttca
gagtttttttcgatagcttcaaagctttatgacaacttttacgacgcatataccgtatac
aaggatctaagaaacaggggctatgtcgtaaaatcaggaatgaagtttggatcaaccttc
gctgtatatcagtttggaccgggaatagaccactcaatatttctagtagaagttctgaag
tacggagataaacttgacccaatacaaataatcagggcaggacgtctatcacactccgta
aggaaaagattcatattagcctacagagacccagcaacgaataggatacagtatttctcg
ttcaaatggctcatgtag
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