Theobroma cacao (cacao): 108663123
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Entry
108663123 CDS
T02994
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
108663123
Enzymes [BR:
tcc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
108663123
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
108663123
NCBI-ProteinID:
XP_017981489
UniProt:
A0AB32WUQ2
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Position
8:complement(3556472..3560877)
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AA seq
648 aa
AA seq
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MSPIGVQLHIQDTHVMIDNGVLQLTLSNPDGIVTGIRYNDIDNLLEVLNEESNRGYWDLV
WSSPGTAGTAGLFDVIKGTIFKVIVENVDQVEVSFTRTWDSSQEGKVVPLNIDKRFIVLR
GCSGFYSYAIYEHLKDWPGFNLAETRIAFKLRKDKFHYMAMADNRQRYMPLPDDRLPGRG
QALAYPEAVLLVDPVEHELKGEVDDKYQYSCDNKDSQVHGWIRTDPPAVGFWMITPSNEF
RSGGPVKQNLTSHVGPTTLAVFLSAHYSGEDLVPKFSAGEAWKKVFGPVFIYLNCAMEGD
DPLSLWEDAKEQMITEFQSWPYTFPASEDFPKSDQRGSVSGRLLVHDRYVSDDNIPANGA
YIGLAPPGTAGSWQRECKDYQFWTQTDVNGYFLINDIRTADYNLYAWVPGFIGDYRSDVA
ITITPGSYIEVGDLIYEPPRNGPTLWEIGIPDRSAAEFYVPDPNPKYINKLYVNHPDRFR
QYGLWERYAELYPVGDLVYTVGSSDYKKDWFFAQVTRKTDNNKYQGTTWQIKFKLDNVDQ
SNSYKLRLAIASATLSELQIRINDPKGNPLFSSGLFGRDNSIARHGIHGLYWLYNVDIPG
KLLVQGDNTIFLTQPRSSGPFQGIMYDYIRLEGPPTSSSKKEHMSALS
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcctattggggttcaactccatattcaggatactcatgtgatgatagataatggc
gtactccaactcacattatcgaaccctgatggaattgtgaccggcattcgatataatgac
attgacaacttgctggaagttctaaatgaagaatcgaatagagggtactgggaccttgtg
tggagctcaccgggtactgctggaactgctggcttatttgacgtgattaagggaacaatt
tttaaggttatagtggaaaatgtggatcaagttgaggtttccttcacaagaacgtgggat
tcctcccaagagggcaaggttgttcctctaaatatagacaaaaggttcattgtgctgcgt
ggttgctcaggcttctactcttatgccatttatgagcacttgaaagattggcctggtttt
aacctcgctgaaaccagaatcgcattcaagctgagaaaagacaagtttcactacatggct
atggcagacaataggcaaagatacatgcctctgcctgatgaccggttgccaggaagaggt
caagccctggcttacccagaagcagtcctcctggttgaccccgtggagcacgagttgaaa
ggagaggtcgatgacaagtaccaatattcatgtgataacaaagacagccaagttcacggc
tggatacgcactgacccaccagcagtgggattctggatgatcacgcccagcaacgagttc
cgctccggtggacccgtcaaacagaacttaacctctcatgtgggccccacaacccttgct
gtgtttctcagtgctcattattctggagaagacctggtgccgaaattcagtgccggcgag
gcctggaagaaagtctttggccctgtttttatctatctcaactgtgcaatggaaggagat
gatccgctttcgctttgggaggatgctaaagaacagatgattactgaattccagagctgg
ccttacactttcccagcttccgaggattttcctaaatcggaccaacggggtagtgttagc
ggcagacttcttgtgcatgacaggtacgttagtgatgacaacataccagcaaatggagct
tacataggattggctccaccagggactgctgggtcatggcaaagagaatgcaaggactac
caattttggacccaaacagacgtgaatggctattttttgatcaatgacatacgaactgct
gattataacctttacgcatgggttcctggttttattggagattatcgatctgatgttgct
atcacaataactccaggtagttatattgaggtgggtgatctcatttatgaacctccgaga
aatggacctacattgtgggaaataggcatccctgatcgttctgctgcagaattttatgtc
ccagatcctaatcctaagtacatcaacaaactttatgttaaccatccggatcggtttaga
cagtatggactatgggaaagatatgcagaactgtatcctgttggagatctagtttacaca
gttggcagtagtgactataaaaaagattggttctttgcccaagtaaccaggaagactgat
aataacaagtatcaaggaacaacatggcaaattaaattcaaacttgacaatgtggatcag
agtaattcctataaattacgcttggcgattgcatctgcaactttatccgaattgcagatt
cgaattaatgatccaaaaggaaatcctttattttcaagtggactattcgggagggacaac
tcaattgcaaggcatggaattcatggactctactggctgtacaatgtagatatacctgga
aaactgcttgtacaaggtgataacactatcttcctgacacagccacgaagcagcggcccg
tttcaagggattatgtatgattacatacgattagaaggccccccaacttcaagttccaag
aaagaacatatgagtgcattgtcatag
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