Theobroma cacao (cacao): 108663458
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Entry
108663458 CDS
T02994
Name
(RefSeq) SNW/SKI-interacting protein
KO
K06063
SNW domain-containing protein 1
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108663458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcc03041
]
108663458
Spliceosome [BR:
tcc03041
]
Complex B
Other components
Prp19-related factors
108663458
Complex C
108663458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
108663458
NCBI-ProteinID:
XP_017983036
UniProt:
A0AB32WZF4
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Position
9:complement(5390888..5393266)
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AA seq
607 aa
AA seq
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MVALKDLLPDAKNSTSTYYDHANDPWFRQRFSSSEEEKSSTAIKAKPVPPYMKRAGFVPR
KVEDFGDGGAFPEIHIAQYPLGMGRVKGAKPGSKILPVTVDAHGNLAYDAIVKQNENAKK
IVYSQHKDLIPKILRSEEEGGDEEEEEERQKEIEETMQETKAALEKIVNVRLSAAQPKNV
PKQSSDSNYIKYKPSQQSAAFNSGAKERIIRMVEMPVDPLEPPKFKHKRVPKASGSPPVP
VMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDNFAKLS
EALYVAEQKAREAVSMRSKVQKEMMMKEKERKEQELRALAAKARSERTGTVAPSAAVPMS
SDRNAVDTDMRVDYEPVRERERDMPKESKEEREERLQREKIREERRRERERERRLEAKDA
AMGKKSKITRDRDRDISEKVALGMASTGAGRGGEVMYDQRLFNQEKGMDSGFATDDQYNI
YDKGLFTAQPTLSTLYRPKKDVDSDMYGGADEQLEKMMKTDRFKPDKAFGGTSERSGPRD
RPVEFEKEAEEADPFGLDQFLTEVKKGKKAMEKVGSGGTMKASAGSSMRDGYEGGSSRSR
IGFERGH
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggtggctttaaaggatcttctaccagacgcgaaaaactcaacgtcgacgtattacgac
cacgcaaacgacccatggtttagacaacggtttagttcgtcggaggaagagaaatcctcc
acggcaataaaggcaaaaccagtaccgccttatatgaaacgcgccggatttgttcccaga
aaagttgaagactttggagatggaggtgctttccctgaaatccatatcgctcaataccct
cttggtatgggaagagtaaaaggggcgaaaccaggatcgaagattcttcccgtgaccgtt
gatgctcatgggaatttggcttatgacgcgatagttaagcagaatgagaatgcaaaaaag
attgtttactcgcagcataaggatttgataccgaagattttgaggagtgaggaagagggt
ggtgacgaggaggaagaggaagagaggcagaaagagattgaggaaacaatgcaagaaact
aaggcagccttagagaagattgtgaatgtgagattgagtgctgcacagccgaagaatgtt
cctaaacagtcttctgattcaaattatattaagtataagccttcacagcaatcggctgca
tttaattcaggtgctaaagagaggataattagaatggtggagatgcctgtggatcctctt
gagcctcccaagtttaagcataagagggtcccgaaagcttcagggtctccacctgtgccg
gtgatgcattcccctccacggcctgtgactgtgaaggatcagcaggactggaaaattccg
ccttgtatttcaaactggaagaatccgaaagggtatacaatcccactggataaacgtctt
gctgctgatggaagaggtttacaggacgtacagattaatgataactttgcaaagctgtct
gaggctttgtatgttgcagagcagaaggctagagaagctgtgtcgatgagatcaaaggtg
cagaaagagatgatgatgaaggagaaggaaaggaaggagcaggagttgcgagctttggct
gctaaagctcgttctgagagaactgggacagtggcaccttcagctgctgttccaatgtca
tctgacagaaatgcggtggatactgatatgagagtggattatgagccagtgagggagaga
gaaagggatatgccaaaggaatcaaaggaagaaagggaggagcggttgcagagggagaaa
atacgtgaagaacgacgtagagaaagggagagggagagaaggttggaggccaaagatgcc
gccatgggtaaaaagagtaagattacaagggatagggatagagatatcagtgagaaggtt
gctcttggtatggcttctactggtgctggaagaggtggggaagtgatgtatgatcaaagg
ttatttaaccaggagaaaggaatggattctggatttgcaactgatgatcaatacaacatc
tatgacaagggtctgttcacagcacagccgactctctcaacactctatagaccaaagaaa
gacgtggattctgacatgtatggtggtgcagatgagcagctagagaaaatgatgaaaact
gataggtttaaacctgacaaggcatttggtggtacttctgagaggagtggtccaagggat
aggcctgttgagtttgaaaaggaagctgaggaagctgatccatttggtctggatcagttc
ttgacagaggtcaagaagggtaagaaagccatggaaaaagtgggctctggagggacaatg
aaggcaagtgcaggctcttccatgcgagacggctatgaaggaggctctagtagatctcgc
attggttttgaaagaggacattaa
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