Theobroma cacao (cacao): 18585798
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Entry
18585798 CDS
T02994
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcc03009
]
18585798
Enzymes [BR:
tcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
18585798
Ribosome biogenesis [BR:
tcc03009
]
Eukaryotic type
Pre-60S particles
Helicases
18585798
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
NatA_aux_su
CTT_SPB4
RNA_pol_Rpc4
Motif
Other DBs
NCBI-GeneID:
18585798
NCBI-ProteinID:
XP_007008871
UniProt:
A0AB32UL35
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Position
10:525896..529891
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AA seq
591 aa
AA seq
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MDSPNPSGALTDTRFSDLKPPLPEPVIEALSQNGFTFCTPVQAATIPLLCSFKDVAVDAA
TGSGKTLAFLIPVVEILRRSSTSPPKRHQVMGVIISPTRELSSQIYNVAQPLISTLSNVK
SMLLVGGVEVKADMKKIEEEGANLLIGTPGRLYDIMDRMDVLDFRNLEILILDEADRLLD
MGFQKQINYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVKAETKSLNNSASS
EQLASSKTPSSLHLEYLECEADKKPSQLVDLLIKNKSKKIIIYFMTCACVDYWGVVLPRL
TALKGFSLISLHGKMKQTAREKALAAFTSLSSGILLCTDVAARGLDIPGVDCIVQYDPPQ
DPNVFIHRVGRTARLGRQGSAIVFLLPKEEAYVEFLRIRRVPLQERKCIDDASDVVPQIR
SAAMKDRDVMEKGFRAYVSYIRAYKEHHCSYIFRWKELEIGKLGMGYGLLQLPSMPEVKH
HSLSAEGFTPVENVNRDDIKYKDKSREKQRKKNLQAKKEREQQESKPQKPKKDSNAAAPA
MKKKTAKQRRAAQTIEDEEELTREYRLLKKLKKGAIDESEFAKLTGTEDLL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggactcaccgaatccaagcggcgcgttaaccgacacgcgcttttccgacctgaaacct
cctctcccggagccggttatcgaagccttatctcaaaacggctttacattctgcacccca
gtccaagccgccacaatcccgctgctatgtagcttcaaggacgtagccgtcgacgccgcc
accggctccgggaaaaccctcgctttccttatccctgtcgtagagattctgcgtcggtcc
tccacctctcctcccaaacgtcaccaggtgatgggggtaattatttctcctacaagggag
ctttcgtcacaaatctataacgtagcacagcctctaatttctaccttgtctaatgtaaag
tctatgcttcttgttggaggtgttgaggtgaaagcagacatgaagaaaattgaggaggaa
ggagcaaatttattgattggaacaccaggtagactgtatgacataatggaccggatggat
gtcttggattttcgtaacctcgagattttgattttagatgaggctgataggcttctggat
atgggattccagaagcagataaattatattatatctcgcttgccaaagctccggagaact
ggtcttttttccgctactcaaacagaggcagttgaagagctatctaaagcaggactgagg
aatccagtgagggttgaagttaaagctgagacgaagtcactgaataattcagcttcatcc
gagcaattagcctcatcaaaaacaccttcaagcctccaccttgagtatttggaatgtgaa
gcagataagaaaccatcacagcttgttgatctcctcataaagaacaaatctaaaaaaatt
ataatatatttcatgacttgtgcttgtgttgactattggggagttgttcttccgcgtctt
actgctttgaagggtttctctttaatctctctacatggaaagatgaagcagactgcaagg
gagaaagcattggctgcatttacctctctttcaagtggcattcttctatgtactgatgtt
gcagcacgtgggcttgacattcccggtgttgattgtatagtgcagtatgatccccctcaa
gatccaaatgtattcattcacagagttggtcgaactgctcgtttgggtagacaaggaagt
gccattgttttccttttacctaaggaggaagcttatgtagaatttttgcgcataagaagg
gttcctcttcaagagaggaaatgcattgatgatgcttctgatgttgttcctcagatacgg
tctgccgcaatgaaagaccgtgatgtcatggagaaagggtttagagcatatgtttcttat
atccgtgcatacaaagagcatcactgctcttacattttcagatggaaagaacttgaaatt
ggaaagttaggcatgggatatggtctattgcagctcccttctatgcctgaggtaaagcac
cattcactatctgctgagggtttcactccagttgagaacgtcaatagggatgatatcaag
tataaggacaaatctcgtgagaaacagaggaagaaaaatttgcaagcaaagaaagaacga
gagcaacaagaatcaaaaccccagaagcccaaaaaagactcaaatgctgcagcccccgcc
atgaagaagaaaacagccaaacagagacgtgctgcccaaactattgaagatgaagaggaa
ttgaccagggaataccgtctactgaagaaactgaaaaaaggggctattgatgagagcgaa
tttgccaagttgacaggaactgaagatctactatga
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