Theobroma cacao (cacao): 18586134
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Entry
18586134 CDS
T02994
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcc03016
]
18586134
Transfer RNA biogenesis [BR:
tcc03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
18586134
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
TPR_GEMI5
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
18586134
NCBI-ProteinID:
XP_017984678
UniProt:
A0AB32WYG6
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Position
10:complement(2289967..2296264)
Genome browser
AA seq
1325 aa
AA seq
DB search
MKNLKLYSEITSNLELQSEGEVLLFAAYDIERNRFFFASSDNLIYTLHLSSFQNERAWTK
GPLQAEIDPLGLEPEDVITSFDYLMEKEALIVGTSSGLLLLHNVDGKETEVVGQVEGGVK
CISPSPDGDLLGVTTGFGQLLVMTHDWDLLYETALEDHPEGVDVHELDFLSRDVFGSPIS
WRGDGKYFATLSEMPNSSLKKRLKVWERDTGALHTSSEPKELMGAILEWMPSGAKIAAVC
DRKPEAGPSIVFYERNGLERSSFCINEPVDATVELLKWNCSSDLLAAIVRSGNYDSVKIW
FFCNNHWYLKQEIKYLRKDGVRFMWDPTKPQQLISWTLGGQVTVYKFIWVAAVIGDSTAL
VIDDSKILVTPLSLSLLPPPMYLFSLNFPSAVREMAFYSTKGKNCLAALLSNGCLCVAEL
PAPDTWEELEGKEFSVEPCVSATSLGSFVHLIWLDSHMLLAVSHYGFNHSNCSFQTPSSE
DRLCGFYLQEIELACYEDNLPGLLTCSGWHAKVSYQNLLEGLVMGIVPNPAKRCAAFVQF
DGGEVFEYTSKLGITRRDLKHDEISFSSSCPWMNVVLVGVSEQSQHLLFGLDDMGRLHVS
RRILCSNCSSFSFYSNLADNVITHLILATKQDLLFIVDISDILHGKLELTYENFVHIGSK
RKEEENINYINIWEKGAKVVGVLHGDEAAVILQTNRGNLECIYPRKLVLASIVNALNQKR
FKDALLIVRRHRIDFNVIVDYCGLQAFLQSASEFVRQVNNLSYITEFVCAIKTEKMTETL
YKKFFSLPYCKEQKDLQANDLKGSDASLDATNKVSSVLLAIRRALGQQVPESPARELCIL
TTLARSDPPALEEALERVKVIREMELLDSDDPRRMNCPSSEEALKHLLWLSVSDAVFEAA
LGLYDLNLAAIVALNSQRDPKEFLPFLQELDRLPVLLMRYNIDLRLHRFEKALRHIVSAG
DAHFADCMNLVKKNPQLFPLGLQLITDPIKRGQVLEAWGDHLSDEKCFEDAAATYLCCSS
LPKALKAYRECGNWSGVLTVAGLIKLEKDEVMQLAHELCEELQALGKPGEAGKIALEYCG
DISVGINLLISARDWEEALRVAFLHRREDLVSEVKNASLDCASSLIDEYKEGLEKVGKYL
ARYLAVRQRRLLLAAKLQAEERSINDIDDDTASEASSTFSGMSVYTTGTRKSSAASTRST
VASKARDARRQRSRGKIRPGSPGEEMALVEHLKGMSLTAGAKSELKSLLVSLVMLGKEET
ARKLQHVGENFQLSHMAAVRLAEDTMSNDSIDERAHTLERYVQKVKAELQDSDAFSWRCR
VFLSP
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacctgaagctttactcagagattacttcgaatcttgagttacagtcagaaggc
gaagtattactgttcgctgcatatgatatcgagagaaatcgcttcttctttgcttcttcg
gataatctcatttacaccctccatctttcttctttccaaaatgaaagggcatggactaaa
ggtcctttgcaagcagaaatcgatcccttgggtttggagcctgaggatgtcattacttct
tttgattatcttatggagaaagaagcattgatagtgggtacttctagtgggcttttgctg
ctgcataacgtagatgggaaggaaacagaagttgtcggtcaggtggagggtggagtcaag
tgcatctcacccagtccagatggagatcttcttggtgtgactactggttttgggcaatta
ctggtgatgacgcatgattgggatttgttgtatgagactgcattggaggaccatcctgaa
ggagttgacgtacatgaactggattttttgtccagagatgtttttggaagccccatttct
tggagaggtgatgggaagtactttgccactctgagcgagatgccaaattcttctttgaaa
aagaggcttaaggtctgggaacgggatactggagcattacatacttcctcagaaccaaag
gaattaatgggagctattctggaatggatgcctagtggagcaaaaattgcagctgtctgt
gacaggaagccagaagctggcccatcaatagttttctatgaaaggaatgggttagaaaga
agctcgttttgcattaatgaaccagttgatgcaaccgtagaacttctgaagtggaattgc
agttctgatcttcttgcagccattgtcagatctggaaattatgattctgttaagatctgg
tttttctgtaacaatcattggtatctaaagcaagaaatcaaatacttgaggaaagatgga
gttaggttcatgtgggatccgacaaagccacagcaattaatctcttggactcttggtggg
caggtcacagtttacaaattcatctgggtcgcagctgtcattggagactcaacagctttg
gttattgatgactccaagatacttgtgacccccctttctttgtccttattgccacctcct
atgtatctatttagccttaattttccaagtgctgttcgggaaatggctttttattccacg
aaaggtaagaattgtttggctgcattgttatcaaatggctgtctgtgtgttgcagagctt
cctgcacctgatacttgggaagaactagagggcaaagaatttagcgtagaaccatgtgta
tctgcaacatccttgggatcctttgtacatcttatatggctggattcacacatgcttcta
gctgtttctcattatggatttaatcacagcaattgttctttccaaaccccttcaagtgag
gataggctttgtggtttctatttacaggaaattgagcttgcttgttatgaggataacttg
ccaggtttactgacatgctctggctggcatgcaaaagtttcctatcaaaatttgttggaa
ggacttgtaatggggattgttcctaatcctgctaaaagatgtgcagcttttgttcagttt
gatggcggagaagtttttgaatatacatcaaagttgggaattaccagaagagatttgaaa
catgatgagataagtttttcttcatcttgcccctggatgaatgtggttctggttggtgtc
agtgaacaatcgcagcacttgctttttggtcttgatgatatgggtaggctgcatgtcagt
aggagaatactatgcagcaactgcagcagtttttcattttactcgaatttagctgacaat
gtgatcacacatttgattcttgcaacaaaacaagatttgctttttattgttgacatcagt
gatatattgcatggaaaactggaattaacatatgagaattttgtacatattggtagcaaa
cgaaaagaagaggaaaatattaactatataaatatatgggaaaaaggggccaaagttgtt
ggtgtcctgcatggagatgaagccgctgtcatattgcaaacaaatcgtggaaatctggaa
tgcatctatccaagaaaattggtgctagcttcaattgtcaatgctttgaaccaaaaacgc
tttaaggatgcacttcttatcgtgaggcgacacaggattgattttaatgtgattgttgac
tattgtgggttgcaagcgtttcttcaatcagcttcagagtttgtcaggcaggtcaacaat
ttgagttacataactgagtttgtctgtgccattaaaactgaaaagatgacagagacactt
tacaaaaagtttttctctctaccttactgcaaggagcaaaaggatttacaagccaatgat
ttgaagggttctgatgctagtttagatgctactaacaaggtgtcatcagtccttctggcc
ataaggagggctcttgggcaacaagtaccagaaagccctgcaagggagctctgtattttg
accactctggctcgtagtgatccccctgctcttgaagaggctttggagagggtaaaagtt
atccgagagatggagctattagattctgatgacccaagacgaatgaattgcccatcttct
gaagaagctctgaaacatctcctgtggttatcagtttcagatgctgtctttgaagctgct
ttaggcctttacgatttgaaccttgcagctattgtggcactgaactcccagcgggaccct
aaggaatttcttccctttctccaagaattggatcgtctgcctgttctcttgatgcgctat
aacattgaccttaggctgcacaggtttgagaaagctctcagacacattgtatctgcaggt
gatgcccattttgctgattgcatgaaccttgtgaagaagaatcctcaactttttcctcta
ggacttcagctaataactgatcctataaagagagggcaagtccttgaggcttggggtgat
catcttagtgatgaaaaatgctttgaagatgctgctgcaacttatttgtgttgctccagt
ttgccaaaagctttgaaggcatatcgtgaatgcggtaattggagtggtgtgctgacagtt
gctgggcttataaagctggaaaaagatgaagtaatgcaactggctcatgagctttgtgaa
gaactccaagcccttggtaaaccaggagaagctggcaaaattgctttggagtattgtgga
gatattagtgttgggatcaacttgctaatcagtgctagggactgggaggaggctttgagg
gttgcttttttgcataggagagaggatttagtttctgaagtgaaaaatgcgtcattggat
tgtgcaagcagcctaattgatgaatataaggaagggttggagaaagtggggaaatatttg
gctcgctatttagctgttcgacaaaggagattgttgcttgcagcgaagctccaggcagaa
gaaaggtcgataaatgatattgatgatgatactgcttccgaagctagtagtacattcagt
ggaatgagtgtctacaccacagggacaagaaaaagctctgctgcttccaccaggtcaact
gtggctagcaaggctagagatgcaagacgtcaacgaagcagaggaaaaattcgccctggc
agccctggtgaggagatggctctcgtagaacatttgaaaggcatgtctctaacagctgga
gcaaagagtgaactcaagtccttgttggtttcccttgtaatgcttggcaaggaagaaact
gcacggaagttgcaacatgtgggggagaactttcaactatctcacatggcagcagtcaga
ctagctgaagatacaatgtctaatgatagcatagatgagcgtgcacatactttggagcgt
tatgtacagaaagtaaaagctgaactgcaggattcagatgctttttcgtggcgttgtaga
gtattcctatctccttga
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