Theobroma cacao (cacao): 18586254 Help Entry 18586254          CDS       T02994                                  Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism tcc  Theobroma cacao (cacao) Pathway tcc03040   Spliceosome Brite KEGG Orthology (KO) [BR:tcc00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     18586254  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:tcc03021]     18586254    03041 Spliceosome [BR:tcc03041]     18586254    03036 Chromosome and associated proteins [BR:tcc03036]     18586254 Transcription machinery [BR:tcc03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      18586254 Spliceosome [BR:tcc03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     18586254  Complex B     18586254  Complex C    U2 SnRNP specific factors     18586254 Chromosome and associated proteins [BR:tcc03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      18586254     TFTC complex      18586254 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_EML_2 Beta-prop_BBS7 WDR55 Motif Other DBs NCBI-GeneID:  18586254 NCBI-ProteinID:  XP_007009565 UniProt:  A0AB32ULP5 A0A061FM28 LinkDB All DBs Position 10:3063599..3068732 Genome browser AA seq 1214 aa AA seqDB search MYLYNLTLQQATGIVSAINGNFSGGKIQEIVVARGKILSLLRPDDLGKLQTLHSVEIFGS IRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKIHQETFGKSGCRRIVPGQYL AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGVDCGFDNPI FAAIELDYLEADQDSTGLAAGEAQKHLTFYELDLGLNHVSRKWSEQVDNGANMLVTVPGG GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAATHKQKSMFFFLLQ TEYGDIFKVTLDYGNDGVTELKIKYFDSIPVTSSMCVLKTGFLFAASEFGNHGLYQFQAI GDEPDVESSSSTLMETEEGFQPVFFQPRGLKNLVRIDQAESLMPIMDMKIANLFEEETPQ IFSLCGRGPRSSLRILRPGLAISEMAVSQLPGVPSAVWTVKKNVNDAFDAYIVVSFANAT LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKR TIVKVGSNGLQVVIALSGGELIYFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR FLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVKASVGGEDGADHPASLFL NAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFSIKVRGRPAMLCLSSRPWLGYIH QGHFLLTPLSYETLEFAASFSSDQCAEGVVAVAGDALRVFTIERLGETFNETAIPLRYTP RKFVLQPKRKLLVIIESDQGSYTAEEREVARKECFEAAGMGENGNGNVDQMENGGDDEDK EDPLSDEQYGYPKAESDKWVSCIRVLDPRTATTTCLLELQDNEAAFSVCTVNFHDKEYGT LLAVGTAKGLQFWPKRSLVTGFIHIYRFLEDGRSLELLHKTQVEGVPLALCQFQGRLLAG IGSVLRLYDLGKKRLLRKCENKLFPNTIVCIHTYRDRIYVGDIQESFHFCKYRRDENQLY IFADDVVPRWLTASYHIDFDTMAGADKFGNVYFVRLPQDVSDEIEEDPTGGKIKWEQGRL NGAPNKVEEIVQFHIGDVVTSLQKASLIPGGGECVLYGTVMGSLGALLPFTSRDDVDFFS HLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPG EILKKLEEVRNKII NT seq 3645 nt NT seq  +upstreamnt  +downstreamnt atgtatctctacaacttaactctccaacaggccaccggcatcgtttccgccataaacggc aacttctccggcggaaaaatccaagaaatcgtcgtcgcccgtggcaagatcctttcccta ctccgccccgacgatctcggtaagctccaaacacttcattccgtcgaaatattcgggtcc atacgttccctagctcaatttcgcctgaccggagcccaaaaagactacatagtagtcggg tctgattcgggtcggattgtaatcctcgaatacaacaaagaaaagaacgtctttgataaa attcaccaagaaacttttgggaaatccgggtgtcgccggattgtcccaggtcaatactta gctgttgacccgaaaggaagagctgtaatgattggtgcttgcgagaaacagaaattagtt tatgttttgaatagagatactgctgctaggttaaccatttcgtcgcctttagaagctcat aagtcgcacacgatagtttactccatttgtggtgttgattgtggtttcgataaccctata ttcgctgccattgagttggattacttggaagccgatcaggattccacagggctggctgct ggtgaggcacagaagcatttgacgttttatgaacttgatttagggcttaaccatgtgtct aggaagtggtcggaacaggttgacaatggggcgaatatgttggtcactgttcctggtggt ggtgatgggccgagtggggttttggtttgtgctgagaattttgttatttataagaatcag ggacatccggatgttagggcagtgattcctagacgggccgatttgccagcggaacgtggg gttttgattgtttctgcggctacacataagcagaagtctatgtttttctttcttttgcag acagagtatggggatatttttaaggttacattggattatggaaatgatggtgtgacggag ttgaagattaaatattttgattcaattccagtcacatcttcaatgtgtgtcttgaaaact ggttttttgtttgcggcttcggagtttggaaatcatggtttgtatcagtttcaggctatt ggggatgaacctgatgttgagtcttcgtcttctacattgatggaaacagaagaaggtttc cagccagtgtttttccagcctagagggcttaagaatctagttaggattgatcaagctgag agcctgatgccaataatggacatgaaaattgctaatctctttgaggaagaaacacctcag attttttcactctgtggacgtggtcctcgttcatctttgagaatactaaggcctggttta gcaatcagtgagatggctgtctcgcagcttcctggtgtcccaagtgctgtgtggacggtg aaaaagaatgttaatgatgcctttgatgcgtacattgtcgtgtcatttgccaatgcaacc cttgttctttccattggtgaaacagttgaagaagttagtgatagtgggtttcttgatact actccttctcttgctgtttccttgattggtgatgattcgcttatgcaagttcacccaaat ggtattaggcatataagggaagatggacgtattaatgagtggagaactccggggaaaaga acaattgttaaggttggctcaaatggccttcaagtggttattgcattgagtggaggggag cttatatactttgaggtggatatgactgggcaactgatggaagtggagaagcatgaaatg tctggagatgtggcttgtctggacattgcccctgtacctgaaggaagacagaggtctcgt tttcttgcagttggttcatatgataatacaatccgtatattgtctttagatcctgatgat tgtatgcagattctgagtgtgcagagtgtgtcttcacctcctgagtctctccttttcctt gaggttaaggcatctgttggtggggaggatggtgctgatcaccctgccagtcttttcctt aatgctggtctgcaaaatggagtgctgtttcggacagtagtggatatggttacagggcag ctttctgattcccgttcacgattcttagggctgagagccccaaagttgttctctatcaaa gtgaggggccgacctgcaatgctttgcttgtctagtcgaccgtggcttggttatattcac caaggacattttctgctaacacccctctcttatgagacacttgaatttgctgcctcattt tcatctgatcagtgtgctgaaggtgtcgttgctgttgctggggatgcattgagggttttc accatcgagcgtctgggagaaacctttaatgagactgctattcctttgaggtatactcct aggaagtttgttctgcaacccaagcggaaactgttggtaattattgagagtgaccaagga tcatatactgctgaagagcgtgaagttgcaagaaaggagtgctttgaggctgctgggatg ggagaaaatggtaatggtaatgtggaccaaatggaaaatggtggtgatgatgaggacaaa gaggatcccctctctgatgagcagtatggttacccgaaggcggagtcggacaagtgggtt tcttgcattagagttcttgatccaaggacagctacaacaacatgtcttttggagcttcag gacaatgaagctgctttcagtgtatgcactgtgaattttcatgataaagagtacggaact ctcttggctgttggcacagccaagggtctgcagttttggcccaaaagaagcttagttact ggatttattcatatttataggtttctggaagatggcagatcgcttgagctcctgcacaag acacaagtggaaggtgttcctcttgctttgtgccagtttcagggaagattacttgctggg ataggatctgtgctccgattatatgacttggggaaaaagagactgcttagaaaatgtgag aataagcttttccctaacactattgtctgcatccacacttatcgtgatcgaatatatgtt ggggacatccaagagtcattccatttttgcaagtacaggagggatgaaaatcaactgtat atatttgctgatgatgttgttccacgatggcttactgcatcataccatatagattttgac accatggctggtgcagacaagtttggtaatgtctattttgtgcggctaccccaagatgta tcagatgagatagaagaagatccaactggtggaaagataaaatgggaacaagggaggctc aatggagctcctaacaaggtagaggagatagttcagttccatattggcgatgtggtaact tccttgcagaaggcatctctgataccaggtggtggagaatgtgtcctttatggaacggta atggggagcttgggggcattgcttccattcacttcccgtgatgatgttgacttcttttcc cacctagagatgcatatgagacaggaacaccctcccttgtgcggacgagatcatatggct tatagatctgcgtattttcctgtaaaggacgtgattgatggggatctgtgtgagcagttt cctaccctgcctatggatttgcagagaaaaattgcagacgagttggatcgaactcctggg gagatactgaagaaacttgaagaagtccgaaacaagattatttga

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