Theobroma cacao (cacao): 18586262
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Entry
18586262 CDS
T02994
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc00040
Pentose and glucuronate interconversions
tcc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
18586262
Enzymes [BR:
tcc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
18586262
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
18586262
NCBI-ProteinID:
XP_007009576
UniProt:
A0AB32ULN0
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Position
10:complement(3108148..3111246)
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AA seq
325 aa
AA seq
DB search
MESLPYADADSTLRAIAGQAEGFGRFAIGGLHGPLFCVTSLSDDGPGSLREACRRPGPGW
IVFEVSGVIQLSSYLSVGSYKTIDGRGERVKLTGKGLRLKECENVIICNMEFEGGRGHDV
DGIQIKPNSKHIWIDRCSFKDYDDGLIDITRGSTDITVSRCYFAQHDKTMLIGADPSHVW
DRCIRVTIHHCFFDGTRQRHPRVRFGKVHLYNNYTRNWDIYAVCASVEAQIYSQCNIYEA
GMKKKTFEFYTEKAADREEPRSGLIRSEGDLFLDGAQPCLLTGIGQDSLFHPSEFYQTWT
MEAPSDSLKHVLQICTGWQPIPRPP
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgcttccgtacgccgatgcggacagtaccctaagagcaatcgccggtcaggcg
gagggcttcggccggttcgccatcggcggtctacacggtcctctcttttgcgtcacctca
ttatccgatgacggtccaggttctctccgagaagcctgccggagaccgggaccgggttgg
atcgtgttcgaagtgtcgggagtgatccaactatcatcgtacttaagcgtgggttcttac
aagacaatagatggacgaggtgaaagggttaagctgacaggaaaaggcttgaggttaaag
gaatgtgaaaatgtgatcatttgtaacatggagtttgaaggaggaagaggacatgatgtt
gatggtattcaaataaaacccaattctaaacatatttggattgataggtgtagctttaaa
gactatgatgatgggttgattgatattactagaggaagcactgacatcactgtctctaga
tgttactttgctcaacatgacaagacaatgcttattggagcagacccttctcatgtttgg
gatagatgcattcgggtgactattcaccattgcttttttgacggaactcggcaaaggcat
cctcgtgttagattcggaaaggttcatttgtacaacaactacaccagaaactgggacatt
tatgctgtgtgtgcaagtgtagaagctcagatatattctcaatgcaacatctatgaagct
ggaatgaagaaaaaaacttttgaattttatacagagaaggcagcggatagggaagagcca
aggtctggcttaataagatccgaaggagacttgtttctggatggtgcacaaccatgctta
ttaacgggcataggtcaagacagtttattccatcctagtgaattttatcaaacatggaca
atggaagcaccctcagattctttgaaacatgtccttcaaatatgtacaggttggcaaccc
attcctcggccaccatag
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