Theobroma cacao (cacao): 18586283
Help
Entry
18586283 CDS
T02994
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18586283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcc03041
]
18586283
Spliceosome [BR:
tcc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
18586283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
18586283
NCBI-ProteinID:
XP_017985047
UniProt:
A0AB32X3N6
LinkDB
All DBs
Position
10:3230729..3234761
Genome browser
AA seq
762 aa
AA seq
DB search
MDKDKPATKRSRDRDDKHHRSHHRDSHRRSDHKSSSSRRDERERSFEREGSRDRAAEKYR
EGSYEEVEAKKKRKEREESEEGGEKRAKVGEGNREEKRERRRFGDKVKEEEEIEFSNAAN
GGEPVQNGAAQASLPRTGHPLSTKVPSISTAENKAYSITGSHEVTGSSTDGSSAAGKSGG
NLSLDALAKAKKALQMQKELAEKLKKIPSLNRGPSSSSGVTTGTVQGPASSVTYAIASGP
SSSAVLPPTSVAAASVKQPAGGMASVPGLASIPNLEAVKRAQELAAKMGFRQDPQFAPLI
NLFPGQVQTDVPVPQKPTKAPVLRVDALGREIDEHGNIINVTKPSNLSTLKVNINKQKKD
AFQILKPELEVDPESNPHFDSRMGINKNKLLRPKRMTFQFVEEGKWSKDAEIIKLKSQFG
EAKAKELKAKQAQLAKAKADINPNLIEVSERIITKEKPKDPIPEIEWWDLPILVSGSYGD
ITDGVVNEDKLKMEKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAREK
DRQEMIRQGLIEPPKPKVKLSNLMKVLGSEATQDPTKLEMEIHSAAAEREQAHVDRNIAR
KLTPAERREKKEKKLFDDPNTVETIVSVYKINDLSHPKTRFKVDVNAQENRLTGCTVISE
GISVVVVEGGSKSIKRYGKLMLRRINWTEAVKEEDKDGDEDEEKPPNKCVLVWQGSVAKP
SFSKFSVHECITEAAAKKVFADAGVAHYWDLAVNFSENEFDF
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagataaacccgcaaccaaacggtctcgagaccgagacgacaagcaccaccgt
agccaccaccgcgactcccaccggcgatcggatcataagtcctcctcatcgcgccgtgat
gaacgcgagagatcgtttgagagggagggttcgagagatagggcggcggagaagtatcgt
gagggatcctatgaggaagttgaagcgaagaagaagagaaaagagagggaagagagtgag
gagggaggagagaagagagctaaagttggagaaggaaaccgagaggaaaaaagagagagg
agaagatttggggataaagtaaaagaagaagaggaaattgaattctccaatgctgctaat
ggaggtgaaccagttcaaaatggtgctgctcaggcatcattaccaaggactggtcacccc
ctttctaccaaggtaccttccatttctactgctgaaaataaagcatatagtattaccgga
tctcatgaggttactggatctagtacagatggctcctctgctgctgggaaaagtggtgga
aatctctctcttgatgccttagccaaagctaaaaaggctttacaaatgcagaaagaacta
gcggagaaactgaagaaaataccttcattgaacagaggccctagctccagttcaggagtg
actactggaacagttcagggaccagcctcatcagttacttatgctattgctagtggaccg
tcaagctcagcagtccttcctcctacctctgtggcagcagcttccgtgaagcaacctgct
ggtgggatggcttctgttcctggccttgcatcaatacccaatttagaagctgttaaacgt
gctcaagagctggctgctaagatgggatttcgccaggaccctcagtttgcccctctaata
aacttgttccctggacaggtgcaaacggatgttccggttcctcagaaacctaccaaggcc
cctgttctccgagttgatgcacttggtagggaaattgatgaacatggtaatatcataaat
gtgactaaacccagtaatcttagcacgcttaaggttaacattaacaagcaaaagaaagat
gcattccagatccttaaacctgagctggaggtggatccagaatcaaatccacattttgat
tcgaggatgggaatcaataagaataagcttcttagaccaaaaaggatgacatttcagttt
gtagaggaaggaaaatggtctaaagacgctgagatcattaaactaaagagtcaatttgga
gaagcaaaggcaaaagagctaaaggcaaagcaagcacaattggcaaaagcaaaggctgat
ataaatccaaatttgatagaggtgtcagaaagaattataactaaggagaaaccgaaagac
ccaattcctgaaatagagtggtgggatctgcctattctggtgtctggttcttacggtgac
attactgatggtgtggtgaatgaagataaactgaagatggagaagattaccatttatgtt
gaacatcctcgtccaattgagcctcctgctgagccagctcctccaccgcctcagcccctg
aagttaaccaagaaggagcagaagaaactacgcacacagcgacgcctggccagggaaaag
gatagacaggagatgattagacaaggcctgatagaaccgcccaagccaaaagttaagttg
agcaatttaatgaaagttctaggctctgaagctacccaagatcctactaagcttgaaatg
gaaatccatagtgccgctgctgagcgggaacaggctcatgtagacaggaacattgctcgc
aagcttacccctgctgaacgacgtgaaaagaaagagaaaaagctttttgatgacccaaat
acagtggagactattgtttcagtttacaagatcaatgacctctcacatcccaagacacgc
tttaaagttgatgttaatgcccaagaaaaccgtttgactggttgcactgtgatttctgag
ggtattagtgttgtagttgtggaaggtggaagcaaatccattaagaggtatggaaaactt
atgcttaggcgaataaactggactgaagctgtgaaagaggaagacaaggatggagatgag
gatgaagagaaacctcctaacaagtgtgtgttagtttggcaaggcagcgttgccaaacca
agtttcagtaagttctccgtccatgagtgcatcactgaagcggctgcaaaaaaggttttt
gctgatgctggagtggcccattactgggacctcgcggtaaatttctcagaaaatgaattt
gatttttga
DBGET
integrated database retrieval system
