Theobroma cacao (cacao): 18586417
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Entry
18586417 CDS
T02994
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc00040
Pentose and glucuronate interconversions
tcc01100
Metabolic pathways
Module
tcc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
18586417
Enzymes [BR:
tcc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
18586417
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Beta_helix
Motif
Other DBs
NCBI-GeneID:
18586417
NCBI-ProteinID:
XP_017984282
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Position
10:complement(4152374..4155384)
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AA seq
417 aa
AA seq
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MSNNTSRKERKQKAERKIAVELNVLALSLLFVLASNAKAQPNNGVFDVMNFGAKAGGKTD
ISQALMAAWREACALVSPSKVVIPEGEYMLSQVTLAGPCKAPVEVQVRGNLKAPADPSKF
NNVPSWVTFQRIDHFTLSGAGTFDGQGGYAAWAQNDCKQSKKCNKLPINIRFNFVTNGLV
RDITSVDSKQFHINLLGCKNLTFANITINAPDQSPNTDGIHIGRSSGINITDSRISTGDD
CISLGGGSQNIAITRVTCGPGHGISVGSLGKYKDEPVFGINVVNCALINTSNGVRVKTWP
ASLEGIASDMHFEDIVMVNVSNPVLIDQEYCPSNKCNLKAPSRVKISNVSFKNIRGTSAT
QVAVKLACSSGIPCENVEIGDINLSYIGTEGPATSQCSNVKPTIAGRQTPLACGLIV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataacacatcaagaaaagaaaggaaacaaaaagcagaaagaaagattgcagtg
gaactgaatgtgctagctctatctttgttatttgttttagcatcaaatgctaaagcacaa
cccaacaatggtgtttttgatgtgatgaattttggtgcaaaggcaggtggaaaaacagat
atcagtcaagcattgatggctgcttggagagaggcctgcgcactggttagtcctagtaaa
gtagtgattccagagggggaatatatgttgagccaggtgactctggcaggcccttgtaaa
gctcctgtggaggttcaagttagaggaaacttgaaggcccccgcagatcctagcaaattc
aacaatgtgcctagttgggttactttccaacgcatcgatcacttcacattatctggggct
ggaacctttgatggccaaggtggatatgctgcttgggcacaaaatgattgcaaacaaagt
aaaaagtgcaacaaacttcccattaatataagattcaacttcgtcaccaatggattagtg
agggacataacctctgtggatagcaaacagtttcacattaacctgttgggttgcaaaaac
cttacttttgcaaatatcaccatcaatgcacctgatcaaagtcccaacactgatggaatt
catatcggacgttcgagtgggattaacattactgattcaagaatctcaaccggtgatgac
tgtatctctcttggcggtggtagccagaacattgccataactagagtaacatgcggacca
ggccatggcatcagcgtcggaagtcttggaaaatacaaggatgaaccagtttttggcatc
aatgttgtgaattgcgctcttattaatacatcgaatggagtaagggtgaaaacttggcca
gcttctttggaaggcattgcatccgatatgcattttgaggacattgttatggttaatgtc
agcaatcctgttctcatcgatcaagaatactgccctagtaataagtgcaacctaaaggct
ccatcgcgtgttaagatcagcaatgttagcttcaagaacatcaggggaacttcagcaaca
caagttgcggttaaacttgcatgtagcagcggcatcccatgtgaaaatgtggagattgga
gacattaatctttcttacattggaacagaaggccctgctacttcccagtgttctaatgtc
aagcctactatcgctggcagacaaactccacttgcatgtggcctcatcgtttaa
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