KEGG   Theobroma cacao (cacao): 18586473
Entry
18586473          CDS       T02994                                 
Name
(RefSeq) splicing factor U2af large subunit B
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    18586473
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tcc03041]
    18586473
Spliceosome [BR:tcc03041]
 Complex A
  U2 snRNP components
   U2 related factors
    18586473
 Complex B
    18586473
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 18586473
NCBI-ProteinID: XP_007009945
UniProt: A0AB32ULX4
LinkDB
Position
10:4603176..4607652
AA seq 569 aa
MTDYEEARYQGNGDNLDNSYGGGSSPQPRPDDQNDSKSQQGSRDYERESSRSREKDREKG
RDKERDKDRDRHRERDRDREKYRDRDRHHRDRHRDRSRERSERRDRGRDRDDDDYYQSRD
YDRRRDYDRDREDRHRRRSQSRSRGRSEHRSKSRSRSRSRSKSKRISGFDMAPPASAMLA
AGAAAAAAAGQIPGTSPTLPGVFPNMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVG
GLPPTANEQSVATFFSHVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMA
VDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPSLNLAAVGLTPGSAGGLEGPDRIFVG
GLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIK
MGDKTLTVRRANQGATQPKPEQESILQHAQQQIALQRLILQPQGVPTNVVCLTQALNVDD
LRDDEEYEDIVEDMRQEGGKYGALVNVVIPRPNPSGEAAPGVGKVFLEYLDVEGSKKAQG
AMNGRKFGGNQVIAVFYPENKFAQGEYDG
NT seq 1710 nt   +upstreamnt  +downstreamnt
atgactgactacgaagaagcgcggtaccaaggcaacggagacaacctcgataacagttat
ggcggaggttcttcacctcagcctcgccccgatgatcaaaacgactctaaatctcagcaa
ggatctcgggattatgagagggagtcctctagaagtagggaaaaggatagagagaaagga
cgcgacaaggaaagggacaaggaccgtgatcgccatagggaaagggatagggatcgagaa
aaatatcgtgatcgggaccgccatcacagagatcgtcatagggatcgtagtagggaacgc
agtgagaggagggatcggggaagagatagggatgatgatgattattaccagagtcgagac
tatgacagaagaagggactatgatagagacagggaggacaggcataggcgccggtctcaa
tctcgttcaaggggtagatctgaacacagatcaaagtcaagatctcgttcacgctcacgc
tcaaagagcaaaagaattagtggttttgacatggcccctccagcttcagcaatgttagct
gctggcgctgcagcagcagctgctgcaggccagattcctgggactagcccaaccttacct
ggagtatttcccaacatgtttcctcttgcaaccggtcagccatttggtgctctccctgta
atgccagttcaggcaatgactcagcaggctactcggcatgctcgtcgggtttacgttgga
gggcttcctcctacagcaaatgaacagtcagtcgcaaccttctttagccatgtcatggct
gcaattggtggaaacactgctggtccaggggatgctgttgttaatgtctacataaaccat
gaaaagaagtttgcttttgtagagatgagatctgttgaggaggccagtaatgcaatggct
gtagatgggattatttttgagggagcacctgtgaaggtgaggagacctagtgactataat
ccctcgcttgctgcaactcttggtccaagccagcccaatcccagtcttaatctagctgct
gtgggtctaactcctggttctgctggtgggcttgagggtccagatcgcatatttgttggc
gggcttccgtattacttcacagaagcacagatcagggagctattggagtcttttgggcct
cttcgaggttttgatctagtaaaagatagagaaactggaaactcgaaaggctatgctttt
tgtgtttatcaagacctgtcagttacagatatagcttgtgctgctctaaatgggattaaa
atgggtgataaaactctcactgttaggcgagcaaaccagggtgctacccaacctaagcca
gagcaagagagtatactccagcatgcacagcagcagattgctttgcagaggcttattttg
caaccacaaggtgtgcctacaaatgttgtgtgcctgactcaagcacttaatgtagatgat
ctcagagatgatgaggagtatgaagacattgtggaagacatgagacaagagggtggaaaa
tatggtgcattggtgaatgttgtcatcccacgcccaaacccaagtggagaagcagcccca
ggtgtagggaaggtatttctggagtacttagacgtcgaaggttcaaagaaagctcaaggt
gcgatgaatggtcggaaatttggtggaaatcaagttattgccgtgttttatccggagaac
aagtttgcacagggggaatacgatggctaa

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