Theobroma cacao (cacao): 18586517
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Entry
18586517 CDS
T02994
Name
(RefSeq) protein RNA-directed DNA methylation 3
Organism
tcc
Theobroma cacao (cacao)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW1_SPT5
KOW4_SPT5
Spt5-NGN
KOW
KOWx_SPT5
KOW5_SPT5
Motif
Other DBs
NCBI-GeneID:
18586517
NCBI-ProteinID:
XP_017984655
UniProt:
A0AB32X180
LinkDB
All DBs
Position
10:5059190..5070240
Genome browser
AA seq
1503 aa
AA seq
DB search
MSSKGKGKAKEVFSGKRKSSGAEESRRKRKNPGVLQFFEDAAGVDHNDASDDSDIDNYFM
EEELDLNVNIEAGKTHNLPFVPKEEVIEEEFDKIMEERYKDGAGFVTYAEDSYEAKGSID
RNSALPSSKDPTIWKVKCVVGRERHSAFCLMQKFIDMRSLGNILQIISAFSVDHVKGFFY
IEADRQCDINEACKGLTYIYSSRVAPVPSNEVYHLLSVRTKRSEVSEGMWARVKNGKYKG
DLAQVVAVNNARKRATVKLIPRIDLQAMAAKFGGGVSIKRNVTPAPKLISSSELEEFRPL
IQYRRDRDTGIGFQILDGMMLKDGYLYKRVSIDSLSCWGVMPTKEELLKFSHSDNNESDD
LEWLSQLYGEKKRKKNIKIDKGGEKGEGSMGSGMENSFDLHDLVCFGRKDFGLIVGMEKD
DHYKILKETLEGPVVVTIGQHELKSGPLDTKFTALDQHSKTISINDTVKVLEGQHEGKQG
MVKQIYRGTIFLYDENETDNGGFFCCKSQMCEKVKQYFDACNEKGGEPGTSGFGDFMSSP
KSPLSPKKPWQERETRSDFNRGNRDGMFSIGQTLRIRVGPLKGYLCRVLAVHYSDVTVKL
DSKQKVLTVKNEHLAEVQGKSYAANTSEHDGSNSFKPFELGTEGSSRDWLDRAGTSAEDG
GSNGERSSWPSFSGPGTSHQAEPNHSNLFGSEDTDLKKDGEDSAWGCKVTSNQNASWGAA
VCSGDNDKKTDDACTAWENKATTKQNSAWATGGSDQVDNWDSWNKAAAKTDSGSGASDAW
GKAITSSGDPSGASKDVGGSWGQAKLKIGNPADSSNITSWEKDKNMNVGDDSWKKSESWD
KGKNVTQNLSGVWDNAAAKKNQPNLWGKGKDVVEAGSWEKNGNSSVRQGHWNNNALGSNQ
RESWGKKNDAGGSEDNTWGKAAEKWSNKDDSGGSKGNWGSSTLAAENAKGGWGSAGACLT
KPEAVSTDESSGWKKANDFSGNQTTNWDCKKDASECATGWTKGGSHESDGWNKGKVADGG
TSWGKHDGGEQLGGSSWGEQPLGNAENDSKGWKNQNDGWNKPRSSGRDQGSGGWDKGKME
SKDGKAPQGSGWGKGGNWNSNSDGASRGSNWARKADPHVGSGEATQDSIWGKKSDWNSGS
GDMNQDSNWGKKSSWDAGWNSGSGSANQDPSWAKKNDLDFGSGDATKGSGWGKKSDWNSG
SGDANQDSGWKKRSDWNSGNGNEDQNVTFTSRGSGGNWRGGFGGRDSSGRGFRGRGNADR
GGFRGRGRSDRGGFRGGGDGGYGGRSGDRGGFGGRGRGRRDQNGGWNNGDSGEDKSFSWN
KEANNSEGWKSNNEVKCNQGWNGRTGPGDKAKTWNQSNADQGGQSSIWNQSNDVKQGGWN
KGTGSTNEADGSEDNNWKSSSSSARTKCSSWNHPTGSKEINEGNNQGPGSAGGSDNQGSG
WNRGAGSGDQARTWNQSNAADGGPSSGWNESKDVEETSGNRDSWGKAASSSWEQGSGSSR
GGW
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgaaggggaaagggaaggcgaaggaggtgttctccgggaagcggaagagcagc
ggagccgaggagagccgtcggaaacggaagaacccgggagtccttcagttctttgaagac
gctgctggcgttgatcacaatgacgccagcgatgacagcgatatcgataattattttatg
gaagaagaactagatcttaatgtaaatattgaagctggaaaaacccataaccttccattt
gttcccaaggaagaggtgattgaggaagagtttgataaaataatggaggagcgatacaag
gatggtgctgggtttgtgacatatgctgaagattcttatgaagctaagggatcaattgat
agaaactctgctttgccttcttccaaggatccaaccatatggaaagttaaatgtgtggtt
ggacgtgaaaggcattcagctttctgtctcatgcagaagtttattgatatgagatcgctg
ggcaatatattacagataatatcagcattctctgtagaccacgttaagggttttttctac
attgaagccgacagacaatgtgatattaatgaggcttgtaaaggactgacttacatttat
tcttctcgagtggcgccagttccaagcaatgaagtttatcatttgctctctgtcagaact
aaacgtagtgaagtctctgagggcatgtgggctcgggtaaagaatgggaagtataagggg
gaccttgcccaggttgtggctgtaaataatgcacggaaaagagcaacagtaaaactcatt
ccaagaattgatctgcaggcgatggctgcaaaatttggtggtggagtttccatcaagagg
aatgttacaccagcaccaaaattgataagttcaagtgaactcgaggagtttcggcctctc
attcagtataggcgtgaccgtgacactggcattggttttcagatacttgatggcatgatg
ctcaaggatggatatctttataaaagagtatctatagattcattaagctgctggggggtt
atgcctacaaaggaggagctcctgaagtttagccattctgataataatgaatctgatgat
ctggagtggctttcacagctttatggtgaaaaaaaaagaaaaaagaacatcaaaattgat
aaaggaggtgaaaaaggagagggctcaatggggtctggcatggagaatagctttgatctg
catgatcttgtctgttttggccggaaagattttggtcttattgttggcatggaaaaagat
gatcattacaagattctaaaagagactttagaaggacctgttgtagtaactattggacag
catgagttaaagagtggacccctggatacaaagtttactgctttggatcagcactcaaag
actatatccattaatgacactgtcaaggtcttggaaggtcaacatgagggtaagcaaggg
atggttaaacaaatctatagagggaccatatttttgtatgatgaaaatgagacagataat
ggtggttttttctgctgtaaatcacaaatgtgcgagaaagtcaagcaatattttgatgca
tgcaatgagaagggtggtgagcctggtacttctggctttggggatttcatgtcatctcct
aaatccccattatcgcctaaaaagccttggcaagaaagggaaactagaagtgatttcaac
agggggaacagagatggaatgttctccattggtcaaaccttaagaattcgagtaggccct
ttgaaaggatacctttgccgtgtcttagctgtgcattattcagatgttactgtgaagctg
gattctaagcagaaggttctaacagttaaaaatgagcatcttgctgaggtccaagggaag
agctatgctgcaaatacaagtgaacatgatgggtcaaattcattcaaaccatttgaactt
ggaacggaaggctcctctagagattggttggatagagcaggaacatcagctgaggatggt
gggtccaatggtgaaaggagctcctggcctagtttctctgggcctggcacttcgcaccag
gctgaaccgaatcattcaaatctatttggttctgaggatactgatctgaagaaagatggt
gaagattctgcctgggggtgcaaggtgacttcaaaccagaatgcatcttggggtgcagca
gtttgttctggggataatgataaaaaaacagatgatgcatgtactgcttgggaaaacaag
gcgactacaaagcagaattcagcatgggctacaggtggcagtgatcaagttgataattgg
gacagttggaataaagctgctgccaagactgactctggcagtggtgcatctgatgcttgg
ggtaaagctataacctctagtggagatccatcaggtgcttcaaaagatgttggaggcagc
tggggtcaagcaaaacttaaaattggaaatcctgctgattcctcaaatatcacctcttgg
gagaaagataaaaatatgaatgttggtgatgacagttggaaaaagtcagaaagttgggat
aaaggaaagaatgtcactcaaaacttatctggtgtgtgggacaatgcagctgctaaaaag
aatcaaccaaatttgtggggcaaaggtaaagatgtggttgaggcaggatcatgggagaag
aatggaaactcaagtgttagacagggccattggaacaataatgctttaggatcaaatcaa
cgagaaagttggggtaaaaagaatgatgctggtggtagcgaagacaatacttggggtaaa
gctgcagagaagtggagcaataaagatgattctggtggaagcaagggaaactggggaagc
tcaacacttgcggcagaaaatgcaaagggaggttggggaagtgcaggtgcatgtttgacc
aaaccagaagcagtgagcactgatgaatctagcggctggaagaaagccaatgatttcagt
gggaatcaaactacgaactgggactgcaagaaagatgcaagtgaatgtgcaacaggttgg
acaaaaggtggatcccatgagtctgatggctggaataaaggaaaggtcgctgatggagga
acttcctggggcaaacatgatggaggtgaacaacttgggggatcttcatggggtgaacaa
cctcttggaaatgcagagaatgattccaagggctggaagaaccaaaatgatggttggaat
aaaccaagaagttctggcagggatcagggatctggtgggtgggacaagggaaagatggaa
agcaaagatggtaaagctcctcagggttctggttggggtaagggaggcaattggaactct
aattctgatggagcaagccggggttctaattgggctaggaaagctgatccacatgtagga
tctggtgaagcaactcaagattctatttggggaaagaaaagtgattggaactcaggatct
ggagatatgaaccaggattcaaactggggtaagaaaagcagttgggatgctggttggaac
tctggttctggtagtgcaaaccaggatcccagttgggctaagaaaaatgatttggatttt
ggatctggtgatgcaaccaaaggttctggttggggaaagaaaagtgactggaactcagga
tctggggatgcaaaccaggattcaggttggaagaagagaagtgattggaactctggaaat
ggaaatgaagaccaaaatgtgacttttactagtaggggaagtggtggaaattggagggga
ggttttggtggtagggatagttcaggtagaggctttagaggtagggggaatgcagacaga
ggaggttttcggggtagaggtagatcagatagagggggttttcggggtggaggtgatgga
ggctatggtggtagaagtggtgacaggggaggctttggtggtagaggacgtggaaggagg
gatcaaaatgggggttggaacaatggtgattctggtgaagataagtctttcagctggaac
aaagaggcaaacaacagtgaagggtggaaaagtaataatgaagtgaagtgtaaccaaggc
tggaatggtagaacaggtcccggagataaagctaagacttggaatcaatcaaatgctgat
caaggaggccaatcttccatttggaatcaatcgaatgatgtaaaacaaggtggctggaat
aaaggcactggttcaactaatgaagcagatgggagtgaggataacaactggaagtcttcc
agttcatctgctcgaaccaaatgttctagctggaaccatccaacaggcagcaaggaaatt
aatgaaggtaacaatcaaggacctggctctgctggaggctcggataaccaaggatcaggc
tggaacagaggagcaggctctggagatcaagctaggacttggaatcaatcaaatgctgcc
gatggaggcccatcttctggttggaatgagtcaaaagatgtagaagaaactagcgggaat
cgagattcatggggtaaggcagcatcaagttcttgggaacagggtagtggtagtagcagg
ggaggatggtaa
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integrated database retrieval system
