Theobroma cacao (cacao): 18586687
Help
Entry
18586687 CDS
T02994
Name
(RefSeq) U1 small nuclear ribonucleoprotein C
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18586687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcc03041
]
18586687
Spliceosome [BR:
tcc03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
18586687
Complex B
18586687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
CLIP1_ZNF
LTI65_LTI78_NYQTKV
Motif
Other DBs
NCBI-GeneID:
18586687
NCBI-ProteinID:
XP_017985170
UniProt:
A0A061FQX2
A0AB32X2D8
LinkDB
All DBs
Position
10:8868962..8872089
Genome browser
AA seq
208 aa
AA seq
DB search
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ
AAAFQQVGAAFNQHLMAQRPRLPVLPTPVMPIPGAAPLPMNQPMVPGIRPPVLPRPLPGP
PGYVPAPGMPPMVAPPGAPSLPGQINGVPRPPTLAPLTTVPGTATTPTSSNAAPTMVTPA
SYQTNPAAPTGGGFDNFNANAQPSEANH
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggtattattgtgattactgcgacacttatttgacccacgactctccatcagtt
aggaaacaacacaatgctggttacaaacacaaggcaaatgttagaacttactaccagcaa
tttgaggagcaacagacccagagcttaattgaccaaaggatcaaggaacatcttggtcaa
gctgcagctttccagcaggttggagctgctttcaatcaacatctgatggctcagaggccc
cgccttcctgttcttcctacacctgttatgccgattccaggggctgcgccgttacctatg
aatcaaccaatggtcccagggattagaccccctgttctgccaagaccacttccaggtcct
ccaggttatgttcctgctccaggcatgccaccaatggtggcaccaccaggtgctccttcc
ttgcctggtcaaataaatggtgttccacggcctcctacattggctcccctgacaacagtt
cctggaactgcaacgacaccaacttcttctaatgcagcgcccaccatggttacacctgca
agttatcaaaccaatcctgctgccccaacaggtggagggtttgacaatttcaatgccaat
gcacagccttctgaagctaatcattaa
DBGET
integrated database retrieval system
