Theobroma cacao (cacao): 18586836
Help
Entry
18586836 CDS
T02994
Name
(RefSeq) ribosome biogenesis protein bms1
KO
K14569
ribosome biogenesis protein BMS1
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
18586836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcc03009
]
18586836
Ribosome biogenesis [BR:
tcc03009
]
Eukaryotic type
90S particles
GTPase
18586836
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Tsr1_G-like
GTP_EFTU
AAA_16
AAA
AAA_22
MMR_HSR1
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
18586836
NCBI-ProteinID:
XP_017985021
UniProt:
A0AB32X3B5
LinkDB
All DBs
Position
10:14790075..14802455
Genome browser
AA seq
1219 aa
AA seq
DB search
MAMDSGAGEQSHKAHRSRQSGASAKRKAQAKAANKNQNSDRRQQNPKAFAFRSNAKAKRL
QSRAVEKEQRRLHLPVIDRSYSEPPPFVVVVQGPPQVGKSLVIKSLVKHYTKHNLPEVRG
PITIVSGKQRRLQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGF
PKVMGVLTHLDKFKDVKKLKKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYPKREIHNLA
RFISVMKFPPLSWRISHPYILVDRFEDVTPPDRVQMNNKCDRNVTLYGYLRGCNLKKGTK
VHIAGVGDFSLAGVTGLSDPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYINI
NDHFVQYSKVDEMGGTLRKGKERDVGEALVKSLQNIKNPIDEKLEKSKISLFSQNPNGLL
ETEGGKKDCDESPKHIRDIEPLEQYQPGEEDDAAQFDEESAHSDLDGSKSSDLDDEGSNF
GEENADALERPGRVMEQVEFHNGRKRRKAIFGNSIDHSSLKVVDEENADDEYDDDDEDEG
EDDGSDEDTQSFLGSEFSDGDNEDLKSDEDGMGNISKWRALLVERTAKKQNINLMQLVYG
KSASTSNTFINEVQDDSENEESDGEFFKPKGEQKKNLKEGLDSDNINTEDCSKSTNYSAL
KNWKEEEVYGSVRDRFVTGDWSKAALRNQMSEAKTEAEDDVYGDFEDLETGEKCESHQKE
DSSNGAIQNKDDAATEERRLKKLALRAKFDAQYDGSESPEEETDARHGFKFHQSQANDSG
YYDKLKEEIEHQKQMNIAELNDLDEATRLEIEGFCTGMYLRLEVHGVPFEMVEYFDPCHP
VLVGGIGLGEENVGYMQTRLKRHRWHKKVLKTRDPIIVSIGWRRYQTTPVYAIEDQNGRH
RMLKYTPEHMHCLAMFWGPLAPPKSGVLAVQSLSNNQAAFRIIATAYVLEFNHAAQIVKK
IKLVGYPCKIFKRTALIKDMFTSDLEVARFEGAAVRTVSGIRGQVKKAAKEEIGNQPKKK
GGQPREGIARCTFEDRILMSDIVFLRAWTRVEVPQFYNPLTTSLQPRQTTWQGMKTVAEL
RREHNLPIPVNKDSLYKPIERKPRKFNPLVIPKALQADLPFESKPKNIPHRKRPLLEDRR
AVVMEPHERKVHALVQQLQLIRNDKMKKRRLKEEQKRKELETQRAKDEQLLRKRRREERQ
ERYREQDKLKKKIRRHAEA
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggctatggatagtggcgccggtgagcagtcgcacaaggctcaccgctctcgccagtcg
ggcgcctccgctaaaaggaaagcccaagccaaagccgcaaacaagaatcaaaactctgac
cggaggcagcaaaaccctaaggcattcgcttttcgttccaatgcgaaagcgaagcgattg
caatcacgcgccgtagagaaagagcagcgtaggcttcatcttcctgttatcgatcgttcc
tatagcgaaccgcctccctttgtagttgtcgtgcagggcccccctcaggttggaaagtct
ctggtaataaagtctcttgtaaagcattacacaaagcataatttacctgaggttcgagga
ccaattaccattgtatcaggaaagcaacggcggctgcagtttgttgagtgtccaaatgat
atcaatggcatgattgatgccgcaaagtttgctgatctagcattgcttctcatagatgga
agttacggctttgaaatggaaacatttgaattccttaacatattgcaagttcatggcttc
ccaaaggtgatgggggttcttactcaccttgataaatttaaggacgtaaagaaactaaag
aaaacaaaacagcgtcttaagcatcgtttctggacagaaatatatgatggcgctaaattg
ttttatttatctggtctcattcatgggaaatatccaaagcgtgaaattcacaatcttgca
agatttatctctgttatgaagttccctcctttgtcgtggagaatttctcatccttatatc
ttggttgatcgttttgaagatgttactccccctgacagagtgcaaatgaataataaatgt
gatagaaatgtcacactttatggttatttgcggggttgtaatttgaaaaaaggaactaag
gtccatattgctggtgttggagactttagtttagctggtgttacaggcctatctgatcct
tgtcctttaccatcagctgcaaaaaagaagggattgcgtgacaaagaaaaacttttttat
gcccccatgtctggacttggggacctgttgtatgacaaagatgcggtctacataaacatt
aatgaccattttgttcaatattctaaagttgatgaaatggggggtacactacgtaaaggg
aaggaacgagatgttggggaggccttggtgaaatcactgcagaatataaagaacccaatt
gatgagaagttagaaaaaagcaaaatttccctattcagtcagaatcctaatggcttgttg
gaaactgaaggtggcaaaaaggattgtgacgaatcaccaaagcatattcgtgatatagag
cctttggagcaataccagcctggtgaagaagatgatgctgctcagtttgatgaagaaagt
gctcacagtgatctggatggttcaaagtcttcagatcttgatgacgaaggtagcaatttt
ggtgaagaaaatgctgatgcattagagagaccaggtcgagttatggaacaggttgaattt
cacaatggtaggaaaaggagaaaggcaatctttggaaacagcattgatcatagtagtctc
aaggttgtagatgaagagaatgcagatgatgaatatgatgatgatgatgaagatgaaggt
gaagatgatggaagcgatgaagacacccagtcatttttaggttcagagttttcagatggt
gataacgaggatctgaagtctgatgaagatggcatgggaaacatatcaaagtggagagca
ttgttggtggaaaggacggctaagaaacaaaatataaatcttatgcagcttgtatatgga
aaatctgcatcaacatcaaatacttttattaatgaagtgcaggatgatagtgagaatgaa
gagagtgatggtgaattttttaagccaaaaggagaacagaaaaagaatttgaaagaagga
ttagacagtgataacatcaacactgaggactgttccaaatccacaaattattcagcgctt
aagaactggaaagaggaagaagtatatgggagtgttcgtgatcgttttgtcactggtgat
tggtctaaagctgctctcagaaatcaaatgtcagaagctaaaactgaagcagaagatgat
gtgtatggtgactttgaagatttagaaactggtgagaagtgcgagagccatcagaaagaa
gattccagtaatggtgcaatccagaacaaagatgatgctgcaactgaggagcggaggtta
aaaaagctagctctccgtgcaaaatttgatgctcaatatgatgggtctgaatcaccagaa
gaagaaactgatgcacgacatgggttcaaatttcaccaaagtcaagcaaatgacagtggt
tattatgacaagttgaaagaagagattgaacaccagaaacaaatgaatatagcagaactc
aatgatcttgatgaggctacccggctggaaattgagggattctgcacggggatgtatcta
agattggaagttcatggtgttcctttcgagatggttgaatattttgatccctgccatcct
gttttggttggaggaattggtcttggtgaggaaaatgtgggatacatgcagacaaggcta
aaacggcacagatggcacaagaaagtgctgaagactagagatccaataattgtttcaatt
ggatggaggcgttaccagaccaccccagtttatgccattgaggaccagaatggaaggcat
cgcatgctcaagtacactccagaacatatgcattgccttgcaatgttttggggccccctt
gcccctcccaagtctggagtgcttgctgttcagagtttatcaaacaatcaggcagcattt
cgcatcatagcaacagcatatgtacttgagtttaaccatgcagcacagatagtgaaaaaa
attaagctggttggttacccctgtaaaatattcaagagaacagccctcatcaaggatatg
tttacttcagatcttgaagtagctcggtttgagggtgctgcagttcgaactgtcagtggg
atccgtgggcaggtgaaaaaggctgcgaaggaagagattggtaatcagcccaagaaaaag
ggagggcaacctagggaaggaattgcaaggtgcacctttgaggatcggattttgatgagt
gacatagtctttttgcgtgcatggactcgagttgaagttcctcagttttacaatccatta
actacttcattgcaacctcgtcaaacaacctggcaaggaatgaaaactgtagcagaattg
aggagggaacacaatcttcctattcctgttaacaaggattccctctacaagccaattgag
agaaagccaaggaagttcaatcccctggtcattcctaaggcattacaggcggatcttcca
tttgaatcaaagcccaagaatatacctcatcggaaacgaccacttcttgaagatagaaga
gctgttgtcatggagcctcatgaacgaaaagttcatgctcttgttcagcaacttcaattg
attaggaatgacaagatgaagaagcgaaggctcaaggaggagcaaaagaggaaagaactt
gagacacagagagcaaaggatgagcagttattaagaaagcgccggagagaagaaaggcag
gagagatacagggagcaggacaaactaaagaagaagatccggaggcatgcagaagcctga
DBGET
integrated database retrieval system