Theobroma cacao (cacao): 18587138
Help
Entry
18587138 CDS
T02994
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
18587138
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcc04040
]
18587138
Ion channels [BR:
tcc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
18587138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
DUF6525
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
18587138
NCBI-ProteinID:
XP_007010880
UniProt:
A0AB32UMM8
LinkDB
All DBs
Position
3:12618041..12655908
Genome browser
AA seq
771 aa
AA seq
DB search
MACYDKDEVPMLSDIHPQPSENNQDSQFQALFSRTQSASISIPMNSIESYESTNLVGHTG
PLRNERKIPFIQMSGPLYISRKPENSFHPNQSVAGHKMVESKAEKFPSFNGVDEKDWSDN
NYVGKNEHLLRSGQLGMCNDPYCTTCPTYYNFKADQEKNSKASGIFDTKFHNVLYGDAKG
WARRLMSFLSSYVPGVMNPHAKVVQQWNQFFVISCLMAVFIDPLFFFLLSVQKDNKCIVI
NQPATKAFVVLRSMTDFIYLLNMLLQFRLAYIAPESRVVGAGELVDHPKKIAVNYLSRYF
FLDLFVVLPLPQIMILLVLPRYLGSSGANFAKNVLRTAILIQYLPRLYRFLPFLAGQSPS
SFIFESAWANFVINLLTFMLSGHVVGSCWYLFGLQRVNQCLRNACHDSNILNCEEFIDCG
YGHTSNRTELPSWKNNANASACFSEDGFPYGIYIQTVNLTTERSIITRYVYSLFWGFQQI
STLAGNQTPSYFVWEVLFTMAIVGLGLLLFALLIGNMQNFLQALGRRRLEMSLRRRDVEQ
WMSHRRLPEELRRKVREAERYNWAATRGVNEEMLFENLPEDLQRDIRRHLFKFVKKVRIF
ALMDDPILDAICERLRQKTYIKGSKVLSRGSLIEKMVFIVRGKMESVGENGVIDPLCEGD
VCGEELLTWCLEHSSVNRDGKKIRIPGQRLLSNRIVRCLTNVEAFSLRAADLEEVTCLFS
RFLRNPRVQGAIRYESRYWRSLAATHIQVAWRYRKKRLNRADTSQSGQSSR
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggcatgttatgataaagatgaggttccaatgctgtcagatattcatcctcaaccatca
gaaaataatcaggattctcagtttcaggcattgttttctaggactcagagtgcttcaatt
tctatcccaatgaactctatagagtcctatgaaagtactaatcttgtcggacatactggc
cccttgaggaatgaaagaaaaataccatttatacagatgagtggtccgctatatattagc
cgtaagcctgaaaattcttttcatccaaatcaaagtgtagcaggccataaaatggtggag
tctaaggcagaaaaatttccttcttttaatggagtggatgaaaaagattggtcagataac
aactatgttggcaaaaatgaacatttactgaggtctggacaactaggaatgtgcaatgat
ccttactgcacaacttgcccaacatattacaatttcaaagcagatcaagagaaaaactca
aaagcttcaggaatctttgataccaagttccataatgttctctatggggatgccaaaggt
tgggctaggagattgatgtcttttctgagttcttatgttcccggagttatgaatcctcat
gctaaagttgttcagcaatggaaccaattttttgtcatttcatgcttgatggcagttttt
atagacccattgtttttcttcttgttgtctgtgcagaaggataacaagtgcatagttatt
aaccagcctgcaactaaagcgtttgtagttttgagaagcatgactgattttatatacctg
cttaacatgctccttcagttcaggttggcttatatagctcctgagtctagagtagttggt
gctggagagttggttgaccatccaaagaaaattgctgtcaattaccttagtagatacttt
tttcttgacttatttgtggtactcccactacctcaaatcatgatattgctggtcctacca
agatatttgggatcatcaggagcaaattttgcaaaaaatgttttacgtacagcaattctt
attcagtaccttcccagattgtataggtttctacctttccttgctggtcagtctccaagt
agctttatatttgagtcggcatgggcaaattttgtcataaaccttctcacatttatgctg
tctggccatgttgttgggtcatgctggtacctctttggattacagagggttaatcaatgt
cttcgaaatgcctgccatgactccaacattttaaattgtgaggagtttatagattgtgga
tatgggcatacttctaatcgtactgaattgccaagttggaagaacaatgcaaatgcttct
gcctgtttttcagaagatggatttccttatggaatatatatacagacagtcaatctaaca
acagaacgaagtattattaccagatatgtatattcattgttttggggatttcagcaaatc
agtactctggctggaaatcaaactccaagctattttgtttgggaagttctttttaccatg
gccattgttggactgggcctcttgctttttgctcttctgattggaaatatgcagaacttt
ctccaggcacttggacggaggaggttagaaatgtcactaagacgtcgtgatgtggagcaa
tggatgagccatcggcgcttgccagaagagcttagaaggaaagtacgagaggccgaacga
tataattgggctgccacaagaggtgtgaatgaagaaatgctttttgagaacttacccgaa
gaccttcagagagatataagacgccatctcttcaagtttgttaagaaagttcgcattttt
gctctcatggatgatcctattttagatgccatctgtgagagattaaggcaaaagacctat
attaaaggaagcaaagttttgtctcgtggtagtctgattgaaaagatggtttttattgtg
cgtgggaaaatggaaagtgttggagaaaacggagtcatagatcccttatgtgaaggggat
gtttgcggcgaggaacttctcacgtggtgtcttgagcattcttcagtaaacagagatgga
aagaaaattaggattcctggacagagattgcttagtaaccgaatagttagatgcctgaca
aatgtagaagcattttcccttcgggctgcagacctagaagaagttacctgtcttttctca
aggttcttgcgcaatcctcgtgttcaaggagccataaggtatgaatcacgctattggaga
agccttgctgctactcatattcaagtagcatggagatacaggaaaaaacgtctgaaccgt
gctgacacctctcaatctggtcaatcttcaaggtag
DBGET
integrated database retrieval system
