Theobroma cacao (cacao): 18587139
Help
Entry
18587139 CDS
T02994
Name
(RefSeq) homeobox-leucine zipper protein HDG11
KO
K09338
homeobox-leucine zipper protein
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcc03000
]
18587139
Transcription factors [BR:
tcc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
18587139
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
18587139
NCBI-ProteinID:
XP_017973835
LinkDB
All DBs
Position
3:12666278..12670513
Genome browser
AA seq
728 aa
AA seq
DB search
MPISIQKQVFLEGTSSPYMEYGSGGGSGSGGDHDASDPSRRKKRYHRHTAHQIQRLEAMF
KECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMKAQHERADNCALRAENDKIRCENI
AIREALKNVICPSCGGPPATEDSYFDEQKLRMENAQLKEELDRVSSIAAKYIGRPISQLP
PVQPIHVSSLDLTMASFGGHGVGVAGPSLDLDLLPGSSSTMPNLPFQPIAISDMDKSLMT
DIAANAMEELLRLLQTNEPLWIKSTNDGRDVLNLESYERIFPRANTHFKSPNVRIEASRD
SGVVIMNGLALVDMFMDSNKWVDLFPTIVSMAKTIEIISSGMMGSHSGSLQLMYEELQVL
SPLVPTREFYILRFCQQIEPGLWAIVNISYDFPQFASQCRSHRLPSGCLIQDMPNGYSKV
TWMEHVEIEDKTPTHRLYRDLIHSGLAFGAERWLATLQRMCERFACLMVSGTSTRDLGGV
IPSPDGKRSMMKLAQRMVNNFCTSISTSNSHRWTTLSGLNEVGVRVTVHKSSDPGQPNGV
VLSAATTFWLPVTPQNVFNFFKDERTRPQWDVLSNSNAVQEVAHIANGSHPGNCISVLRA
FNTSQNNMLILQESCIDSSGSLVVYCPVDLPAINVAMSGEDPSYIPLLPSGFTISPDGHP
DQGDGASTSSTVHGNMGRSGGSLITVAFQILVSSLPSAKLNLESVTTVNNLIGTTVQQIK
SALNCPSS
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcctatttccattcaaaaacaagtgtttctggaagggacgtccagtccatatatggag
tacggaagcggaggagggagtgggtccggtggggaccacgatgcctccgacccttcccgc
cggaaaaagcgttaccatcgccatactgctcaccagattcagaggcttgaagcaatgttc
aaggagtgcccacacccggatgagaagcaaaggctacagttgagtagggagctgggcttg
gcacccaggcagatcaagttttggttccagaacagaaggacccagatgaaggcgcaacac
gaaagagccgataactgtgctcttcgtgcagagaatgataagatccgatgtgagaacata
gccatcagagaagcactcaagaatgtcatctgcccttcttgcggtggccctcctgccacc
gaggattcctattttgatgagcaaaagttgcgaatggagaatgcccaattaaaggaggag
cttgatagagtgtctagcattgcagccaagtacatagggaggccgatatcccaactcccg
ccagtacagcctattcatgtttcttcattggatttaaccatggcaagttttggcggccat
ggggttggtgttgctggtccttccctcgatcttgatcttctccctggaagttcctccaca
atgccgaatttacctttccaaccaattgctatctcggacatggataaatccctcatgacc
gatattgcggcaaatgcaatggaggaactgctcaggcttttgcagaccaatgaacctttg
tggatcaagtccaccaatgatggcagagatgttcttaatcttgaaagctatgaaaggatt
tttcctagagctaatacacactttaaatctcccaatgttcggattgaagcttctagagac
tctggtgttgtcatcatgaatggtttagcattggttgacatgttcatggattctaacaaa
tgggtggacctatttccaactattgtgtcaatggccaagactatcgaaataatttcatct
ggaatgatgggcagtcatagtggttctttgcaattgatgtatgaagagttgcaggtgctt
tcaccgctggtaccaacgcgtgaattttatatccttcgcttctgtcagcaaattgagcca
ggcttatgggctatagtgaatatatcatatgattttccccaatttgcttctcaatgtcga
tctcataggcttccttctggatgcttgattcaggacatgcctaatggctactccaaggtt
acctggatggagcatgttgagattgaagacaagactccaactcatcggctctatagggat
ctcattcacagtggtttggcatttggagcagaaaggtggcttgctactctccagagaatg
tgtgagaggtttgcttgcctaatggtatcaggcacttcaacccgggatcttgggggagta
attccatctcctgatggcaagagaagcatgatgaagcttgctcaaaggatggtcaacaat
ttctgcacaagcatcagcacatccaatagtcatcggtggacaacactttctggtttgaat
gaagttggtgttcgggttactgttcataagagttctgatcctggacaacctaatggtgta
gttcttagtgcagctactaccttctggcttcctgttactcctcaaaatgtcttcaacttc
ttcaaggatgagagaactcgacctcagtgggatgttctatcgaatagcaatgcagtgcaa
gaggttgctcatattgcaaatgggtcacatccgggcaattgcatatctgttctacgagcc
tttaatactagtcagaacaatatgttaatacttcaagagagctgcatagacagctcaggg
tcactagtggtatattgcccagttgatttgcctgccatcaacgtagcaatgagcggtgag
gatccttcatatattccactgctgccatcaggttttacaatttcacctgatggccatcca
gaccaaggagatggagcatcaacgagctctactgtgcatggaaacatgggaagatctggg
ggttcactaattacagtagcttttcagatactagtgagcagcttgccatctgctaagctg
aacttagagtcggtgacaactgttaataaccttatcggcaccactgtccagcaaattaag
agtgctttgaactgtcctagttcctga
DBGET
integrated database retrieval system
