Theobroma cacao (cacao): 18587505
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Entry
18587505 CDS
T02994
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcc03021
]
18587505
Transcription machinery [BR:
tcc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
18587505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
Zn_ribbon_Elf1
Baculo_LEF5_C
Sigma70_r3
Motif
Other DBs
NCBI-GeneID:
18587505
NCBI-ProteinID:
XP_007011375
UniProt:
A0AB32UMX8
A0A061FSC5
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All DBs
Position
10:21562723..21564540
Genome browser
AA seq
347 aa
AA seq
DB search
MEKVKVKEKEVVELFEAAKKAADRAAALDGGASEESRCIDALSQLKDFPITYQLLVSTQV
GKQLRCLTKHPRKKIQAFACDLLQIWKNLVIEKKNSDNNNGKLGSKSSVRAEPATAKLAY
AKKVQKTQTNGTANPERVAEETNSVENKVENIIKEERQASSDAKAPPELSSMVKCNDELR
DKVREQIYESLCKVVSEAGDDFLDEVNACDPIRVAVSVESAMFESWGKSNSAKKIRYRST
LFNMKDQNNPDFRRKILLGQVKPEKIVTMTTEEMASDRRKLENQQLKDKAIFNCQRMDAL
TATTDQFKCGRCGSRKTTYCQMQTRSADEPMTTYVTCTNCNNRWKFC
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggtgaaggtgaaggagaaagaggtggtggaattgtttgaagcagccaagaaa
gctgcagacagggcggcggctcttgatggcggagcctccgaggaaagccggtgcattgat
gctctctctcaactcaaggactttcccatcacttatcaactacttgtctccactcaggtt
ggtaaacaacttcggtgtctgacaaaacatcctaggaagaaaatccaggcttttgcttgt
gacttgctgcagatatggaaaaacctggttatcgagaagaagaacagtgataacaacaat
ggaaaattgggaagcaaaagctctgttagagcggagccggcaactgcaaagcttgcctat
gctaagaaggtgcaaaagacacagacgaatggcacagcaaaccctgagagagttgctgaa
gaaacaaattctgtggagaataaggttgaaaacataatcaaagaagaaaggcaagcttct
tctgatgcgaaagctcctccagagctgtcttctatggtgaaatgtaatgatgaattgagg
gacaaagtaagagaacaaatttatgagagcttgtgtaaggtcgtaagtgaggctggtgat
gacttcctagatgaagtaaatgcctgtgatccaataagagtggctgtttctgtggagtct
gccatgtttgagagctggggcaaatctaatagtgctaagaagattcgatacaggtctacc
ttgtttaacatgaaggatcaaaacaacccagatttccggagaaaaatcctgcttggacaa
gtcaagccggagaagattgtcaccatgacaacagaagaaatggcaagtgacaggaggaaa
cttgagaaccaacaactcaaagacaaagctatatttaactgtcagcgtatggatgctcta
acagccacaaccgatcaattcaagtgcggtcgatgtggaagtcggaagacaacctactgt
cagatgcagactcggagtgctgatgaacccatgacaacatatgtaacatgtacaaattgc
aataaccgttggaagttttgctaa
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