Theobroma cacao (cacao): 18587507
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Entry
18587507 CDS
T02994
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcc04121
]
18587507
Enzymes [BR:
tcc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
18587507
Ubiquitin system [BR:
tcc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
18587507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Helicase_C
zf-RING_UBOX
PHD
zf-C3HC4_2
zf-C3HC4
PHD_5
zf-RING_2
RING_XB3-XBAT31
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
18587507
NCBI-ProteinID:
XP_017984679
UniProt:
A0AB32WZI1
LinkDB
All DBs
Position
10:complement(21565879..21579596)
Genome browser
AA seq
1683 aa
AA seq
DB search
MGRKKQSNPRRSGALVIETNGNAEPDLYKQEANQNGQKGKEELVDTEKPFFVEIDKTSWH
SDEHLDISEVVLIDLNLREGFAGYRISEDFYGDSKYSLRFRVCNVCEFISRIKLGHWPVL
SSSDVSLEFVEKNMNDGAEMESVMLSGSFDGLDEGISSLVHLASLKFVTLRPVMGVMLSE
SLSSLRVRVEILKRVFENCESLMENTRQLWKKSMMNVMAWLRPEVMTSEAKYGISESMNM
EVDVYPVKEEETSRPGKRARFDVSGFYEAIKPSKENSMLEDEIPDLLPVLRPYQRRAAYW
MVQREKGDSRSLDEWERSMLSSPLCIPVDFLDDYSKMYFNPFGGNVSRHLESTSPYVYGG
ILADEMGLGKTVELLACIFAHQKPSSEGGVCKDTEAEVTMDEKISLRRLKRERVECICGA
VSENRKYKGLWVQCDICDAWQHSECVGYSPRGKARKASASADEQGLQKPKRRKEITNIVV
REGEHICQPCSELLQATDSPIASGATLIVCPAPILSQWHDEIIRHTRPGSLKTCVYEGVR
NPSLSNASRVDINELVSADIVLTTYDVLKEDLSHDSDRHEGDRRFLRFQKRYPVIPTLLT
RIFWWRICLDEAQMVESNTAAATEMAMRLYAKHHWCITGTPIQRKLDDLYGLLRFLKLSP
FNVSRWWVEVIRDPYERREGGAMEFTHKLFKRIMWRSSKVHVADELQLPPQEECVSWLTF
SPIEEHFYQRQHETCVSYASEVLESLKEDFLKREVPGCSICSGVTFDPLITHTEAAKLLN
SLLKLRQACCHPQVGSFGLRSLQQAPMTMEEILNVLISKTKTEGEEALRMLVSALNGLAG
IAIIEEKLSQAVSLYKEALDITKEHSEDFRLDPLLNIHIHHNLAEILQMVTSLEKLPVEM
QQFSGSSEKASKAHSNELCDQSSVKSQKLYDQENSEINAGNLPDIASDLSENGINNDQDS
NGQCHVSSGTLNKQSLRIDCENLKQRYLSAFTTKLSAAQQEFRKSYMQVCNAFSDIKNED
TVWWLEALHHAEQNKDFSNELIRKIEEAIAGSLKNRRSLRMSSWFQSITALKYHIQTGLD
LLESVRGKLLDRLLEIDKTMERPNEEDIERVRYCRNCQVLGDGPICVHCELEDLFQDYEA
RLFRVNKKDGDIIISAEEAVDLQKKKSALNRFYWNLSQPNKNSTLSDVDNKELKRDVQET
IVVSKSPSQLEVALGVIKSCCKGQLGKEGMLAATKQLHILEGMRKEYRHARLLAIAQAQV
LNAHDEIKMATTRLHIREAENDKSIDALSPNELASASVQNTSDKFMSLTLLSNIKGKLRY
LKGLVLSKNKLPMESSDNSALTQDMTTMSTSIEQKSTCLPKADGEACPVCQERLSNQKMV
FQCGHITCCKCLFVMTEQRSRYWNKSQNKWVMCPICRQHTDVGNIALADDRQIKSPNSAI
LHTIQGGDNGEESLTVQGSYGTKIEAVTRRILWIKSADPKAKVLVFSSWNDVLDVLEHAF
TANDITYIRTKGGRKSHVAISEFRGQTIGEKGIQKIHKKKPEPKFVQVLLILIQHGANGL
NLLEAQHVILVEPLLNPAVEAQAISRVHRIGQENRTLVHRFIVKNTVEESIYKLNRSRNS
SGFVGNTRNQDQPVLTLKDVESLFAAAPKIDEKPTESESLRNLPPSVAAAIAAERRLRGN
LTA
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atgggtaggaaaaagcaatccaatccacgtcgatcgggcgccttagttatagagaccaat
ggtaatgccgaaccagatttgtacaaacaggaagcaaaccaaaacgggcaaaaaggaaag
gaggaactcgtggatacagaaaaaccattctttgtagaaattgataagacttcttggcat
tcggatgagcatcttgatatatctgaggttgttctgattgatttgaatttgagagaaggg
tttgctggttatagaatcagtgaggacttttatggggactccaagtactccttaaggttt
cgagtttgtaatgtctgtgagtttatcagtcgtattaaactaggacattggcctgtgtta
tcttccagtgatgtatctttggaatttgtagagaaaaacatgaatgatggtgcggagatg
gaatcagtgatgttatctgggagttttgatggtcttgatgaaggtatttcttctcttgtg
cacttagcaagtttgaaatttgtgactttgaggccagtgatgggagtaatgctttcagag
agcttgtcatctctcagagtgagggtggagatactaaagagagtttttgaaaattgtgag
tcactcatggagaacacgaggcaactttggaaaaagagtatgatgaatgtcatggcttgg
ttacgtcctgaagtaatgacttctgaggctaagtatggaattagtgaatcaatgaacatg
gaagttgatgtgtatccagtgaaagaagaagaaacttcccgacctgggaaacgtgcgagg
tttgatgtttctggattttacgaagccataaagccatcaaaagagaactcaatgcttgag
gatgaaattcctgacttgctccctgttcttagaccatatcagcgccgtgcagcttattgg
atggtacaaagagagaagggagattcaagaagtctggatgaatgggaaaggagcatgttg
tcttctccattgtgtataccagtggattttctggatgattattcaaaaatgtactttaat
ccatttggtggaaatgtttcgcggcatttggagtccacttctccatatgtctatggcggt
attctagcggatgaaatgggtttggggaagactgttgaactgcttgcttgcatcttcgca
caccagaagccatcatctgaaggtggtgtatgtaaggatactgaagcagaggttactatg
gatgagaaaattagtctcagaaggttgaaaagggagcgtgttgagtgcatatgtggagct
gtaagtgaaaaccgcaaatataaaggattatgggtacagtgtgacatctgtgatgcttgg
caacattcagagtgtgttggttattcacctcgaggaaaagctcgtaaagccagtgcaagt
gccgatgaacaaggactgcaaaagccgaaaagaaggaaagagataaccaatattgttgtc
agagagggagaacatatctgccagccatgttcagagctactacaagctactgactctccc
attgcatcaggtgctactcttatagtctgtccagctcctatattatcccaatggcacgat
gagattatacgtcatacacgtccaggttccttaaaaacttgtgtctatgaaggtgtgaga
aacccttctctttcaaatgcatctagagtggatatcaatgaacttgtcagtgctgacatt
gtattaacaacatatgatgtactcaaagaggacctctctcacgactctgacaggcatgaa
ggtgatcgacgcttcttgagattccagaagaggtaccctgtcattccaactcttctaacc
agaatattttggtggaggatttgtctggatgaagctcaaatggtggagagtaatactgct
gctgcaacagaaatggccatgaggctatatgctaagcatcactggtgtattacaggcact
cctatacaacgcaaacttgatgacttatatggacttttaagattcctgaaactaagtcct
ttcaatgtttcaaggtggtgggtggaagttatacgagatccatatgagaggagagaagga
ggagcaatggaattcacacataaattgtttaaacgaatcatgtggcgttcgtcaaaagta
catgttgcagacgaattgcagcttccccctcaagaggaatgtgtctcttggctcactttc
tcaccaattgaagaacacttttatcaaaggcaacatgaaacatgtgtgagttatgccagt
gaagttcttgaaagtttgaaagaagatttcctgaaaagagaagtcccaggttgtagtatt
tgttctggtgtgactttcgatcctctcatcactcatacagaagctgcaaagctgctgaac
tcactcttgaagcttcgccaagcctgttgtcaccctcaagtaggaagcttcgggctgcgt
tctctgcaacaggccccaatgaccatggaggaaatattaaatgttcttataagcaagacc
aagacagaaggagaggaagcgctccggatgttagttagtgctttaaatgggcttgcagga
atagctataatagaggagaaactttctcaagcagtatcattgtacaaggaagcactggat
atcactaaagagcactctgaggattttcgcctggaccctctgttgaatattcacattcat
cacaatcttgctgagatactccaaatggttacaagcttggagaaacttccagtagagatg
cagcagttctctggaagctctgagaaagcctccaaggcccacagtaatgaattgtgtgat
caaagttctgtgaagagccagaaactttatgaccaagagaattcagaaatcaatgctggg
aatctaccagatatagcatctgacctatcagaaaatggcataaataatgaccaagattct
aatggtcagtgccatgtgtcatccggaactttaaacaaacaatctttgagaatagactgt
gagaatttaaaacagaggtacctatcagcgttcactacaaagttatctgcagctcagcaa
gagttcaggaaatcatacatgcaggtttgtaatgcatttagtgatatcaaaaatgaagat
acagtttggtggttggaagctcttcatcatgctgagcaaaataaggacttctctaacgag
ttaatcagaaagattgaagaggctatcgcaggatctcttaaaaatcgacgctcattgcgg
atgtcttcctggtttcagagtattactgctctaaagtatcacatccagactggtttagat
ctattggaatccgttaggggaaaattgcttgatcgacttttagaaattgataaaacaatg
gaaagaccaaacgaggaagatattgaaagggtgagatactgccgtaattgccaggtcctt
ggtgatggccccatttgtgttcattgtgaactagaggatttattccaggattatgaggca
aggctctttcgtgttaacaaaaaggatggagatataattatttctgccgaagaggcagta
gatttgcagaagaagaagtctgccctaaatcgcttttattggaatttatcacagccaaat
aaaaattcaactttatctgatgttgataataaagaactgaagagagatgttcaagaaaca
atagtggtctcaaagtctccctctcaattggaagtagctcttggagttataaagagctgt
tgcaagggtcagttaggaaaggagggtatgttggcagctacaaaacagctacatattctg
gagggcatgaggaaggaatatcggcatgcaaggctcttagcaattgctcaagcacaagtt
ctgaatgcgcatgacgaaatcaagatggcaaccactcgattgcacataagagaggcagaa
aatgataaatctattgatgccttaagtccaaatgaattggcttcagctagtgtgcaaaac
acaagcgacaagttcatgtccttgactctgttatcaaatatcaaagggaaacttcgttac
ttgaaggggttggttctatccaaaaataagttgccaatggaaagttctgataattcagct
ttaactcaagatatgactaccatgtcaacttccatagaacagaaaagtacatgtctacct
aaagctgatggggaagcttgccctgtttgtcaagaaaggctaagcaatcaaaagatggta
tttcaatgtggacacattacttgctgtaaatgtttatttgtaatgactgagcaaagatca
cgttattggaataaatctcaaaataagtgggtaatgtgcccaatatgtagacagcacaca
gatgttggaaatattgctttagcagatgatagacaaattaaatcacctaactctgccatc
cttcacacaattcaaggtggcgacaatggtgaagaatctttgaccgttcaaggttcctat
ggaacaaagattgaagctgttacaagaaggatattgtggattaagtctgctgacccaaaa
gctaaagttctggttttctctagttggaatgatgttctcgatgtgttagaacatgcattc
actgctaatgacattacctacatccgaacaaaagggggaaggaaatcacatgttgccatc
agcgaatttagaggacagacaattggtgaaaaaggaatccagaagatacataagaagaag
ccagaacccaaatttgttcaagttttattgattttgatccaacatggagcaaatggccta
aatcttttggaggcacagcatgttattcttgtggaaccactactcaatcctgcagtagaa
gcacaagcaatcagcagggtacatcgaattgggcaggagaataggacgcttgttcatcgt
tttatagttaaaaacacagtggaagagagcatatataaactaaacagaagcaggaactct
agtggctttgttgggaacaccaggaatcaagaccagcctgttctgacactcaaagatgtg
gaatccctctttgcagcagcgcccaaaattgatgaaaagccgactgaaagtgaaagtctg
agaaacttgcctccttccgtggctgctgctatagcagctgagaggagactcagaggaaac
ctaactgcatga
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