Theobroma cacao (cacao): 18587909
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Entry
18587909 CDS
T02994
Name
(RefSeq) uncharacterized LOC18587909
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcc03400
]
18587909
DNA repair and recombination proteins [BR:
tcc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
18587909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_ZFYVE26
TPR_2
Motif
Other DBs
NCBI-GeneID:
18587909
NCBI-ProteinID:
XP_007012021
UniProt:
A0AB32UNN2
LinkDB
All DBs
Position
9:1873350..1896895
Genome browser
AA seq
2536 aa
AA seq
DB search
MDKETELLSRLAANHLHLAQFEPLRATLLALRTKNPDLALAILQTIVANSARFENIVWSP
SCPSPSLLTYLSTLELLQFNDPTSIWSFDPDTLRLRAEFLLLVQILIDKVLASLRRDVDL
DKIEKEKECEREGFEAEKPELLDKSEDLKEGNDDLGDCVRVLDRFLELGMRRLKPDVVME
SGDEDAREESKAVLGEVLIEEEEMVCLRKVIMDYADVFDALCGNIQRQLKGLEGGDLGMA
IMVRREDNVRVDSVDEEHKRVLGLIQKNVQLAHLDAIKNCVKDGDIEGAVSLIRFLHLDY
GVEEVEYRTLLQDLLKRVLSEMERFGGSRHSTEEKLLRIYGESLSSNCRHLVQMIQVIHD
GLLFQEIETYRALDNNQIPPPLEHFQKHLVEFKLDADLNNEHLPLNMAASSCLRDMFHYA
RISGLHILECVMNTALSAIKREHIQEATNVLVLFPRLRPLVAAMGWDLLSGKTMLRRNLM
QLCWRSKSKVFQLEESSLYGNWPDEVSCVEHLCDSLCYHLDIASFVACVNSGQPWSSKFS
LLLSGDENIASGSENAQLDTFVENFVLERLSVQTPLRVLFDVVPGIKFQDAIELISMQPI
ASTLEAQKRMQDIELMHMRYALESTVLALGAMGRSMNGEKETHQVALCHLQDLKNHLAGI
KNIPRKILMVNVIISLLHMDDISLNLTHCASPESLFELPAECAWEHIDLTTYEGGNKMVI
SFTGLLLDIVRHNLPSSMTEEVSNDGLSMSARQALEWRISMGQSFVEDLEWRLSILQRLL
PLSERPWSWKEALTILRAAPSKLLNLCMQRAKYDIGEEAVHRFSLSAEDRATLELAEWVD
SAFRELHVSVAKAVSRAADGTSLVQDLDFSSLRSQLGPLATILLCIDVAATSARSANMSQ
QLLDQAQVMLSEIYPGGSPKVGSTYWDQIHEVGVISVLRRVLKRLYEFLEQDSPPALQAI
LTGEISISSTKDSHRQGQRERALALLHQMIEDAHMGKRQFLSGKLHNLARAIADEEMEVN
FTKGEGPGTDRKVQSSLDKDGVLGLGLKAVKQTSSTSMAGDSSMQPVGYDMKDSGKRLFG
PLSAKPTTYLSQFILHIAAIGDIVDGTDTTHDFNFFSLVYEWPKDLLTRLVFDRGSTDAA
GKVAEIMSADFVHEVISACVPPVYPPRSGHGWACIPVIPTCPTSCSENKALSPSAKEAKP
SCYSRSSATPGIPLYPLQLDIIKHLVKISPVRAVLACVFGSSMLYSGSDSSISSSLNDDL
MQAPDADRLFYEFALDQSERFPTLNRWIQMQTNLHRVSEFAVTARQRADDGKVKPETRTV
IKRLREPDSDTESEVDEIVGNSNISTSLDLNAIDSISPDPWHDCLKPETAEVDSTVFLSF
GLENEDPYEKAVERLIDEGKLMDALALSDRFLRNGASDRLLQLLIERGEENHSTSEQSQG
YGGHGIWSNSWQYCLRLKDKQLAAGLALKCMHRWELDAALDVLTMCSCHLPQSDPVRNEV
LQRRQALQRYSHILSVDHHHGSWQEVEAECKQDPEGLALRLAGKGAVSAALEVAESAGLS
TELRRELQGRQLVKLLTADPLNGGGPAEASRFLSSLRDSDDALPVAMGAMQLLPNLRSKQ
LLVHFFLKRRDGNLSDVEVSRLNSWALGLRVLAALPLPWQQRCSSLHEHPHLILEVLLMR
KQLQSASLILKEFPSLRDNSVIISYAAKAIAVSISSPIREPRISVSGTRPKPKPRLGVPA
RSSFTSSLSNLQKEARRAFSWTPRNTGDKTASKDVYRKRKNSGLSPSDRVVWEAMAGIQE
DRVSSYADGQERFPSVSIAEEWMLTGDTGKDDIVRTSHRYESSPDIILFKALLSLCSDEF
VSAKSALELCVNQMKSVLGSQQLPENASMETIGRAYHATETFVQGLIYAKSLLRKLTGGN
DLAINSERSRDADDTSSDAGSSSVGSQSTDELSEVLSQADVWLGRAELLQSLLGSGIAAS
LDDIADKESSAHLRDRLIVDERYSMAVYTCKKCKIDVFPVWNAWGLALIRMEHYAQARVK
FKQALQLYKGDPAPVITEIINTMEGGPPVDVSAVRSMYEHLAKSAPTILDDSLSADSYLN
VLYMPSTFPRSERSRRSQESTNSNSPYGPDCEDGPRSNLDSARYVECVNYLQEYARQHLL
GFMFKHGHFNDACLLFFPLNAVPPPAQPSTMGVVTSSSSPQRPDPLATDYGTIDDLCDLC
IGYGAMPVLEEVISTRISVAKQQDALVNQYTAAALGRICTYCETHRHFNYLYKFQVIKKD
HVAAGLCCIQLFMNSSSQEEAIRHLERAKMHFDEGLSARSKGGESTKLVMKGVRGKSASE
KLTEEGLVKFSARVSIQVEVVKSFNDPDGPQWRHSLFGNPNDLETFRRRCEIAETLVERN
FDLAFQVIYEFNLPAVDIYAGVASSLAERKRGSQLTEFFRNIKGTIDDDDWDQVLGAAIN
VYANRHKERPDRLIDMLTSSHRKVLACVVCGRLKSAFQIASRSGSVADVQYVAHQALHTN
ALPVLDMCKQWLSQYM
NT seq
7611 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagaaaccgagctcctctcgcggctagcggcgaaccatctccacctagctcaa
ttcgagccgttacgagcaacgcttcttgctctacggaccaaaaaccccgaccttgctctg
gcaatccttcaaacgatcgtcgccaactcggcccggttcgagaacattgtctggtcacct
tcttgtccatccccatctcttctaacgtatctttccactctcgaactcttgcaattcaac
gatcctacttcgatatggagtttcgatcccgatacattgcggctacgcgcggaatttttg
ttgttagttcaaattttgatcgataaggtgttggctagtttgagaagagatgttgatttg
gataagatcgaaaaagagaaggaatgtgagcgtgagggttttgaggcagagaaacctgag
ttgttagataaaagtgaggatttgaaagagggaaacgatgacctgggagattgtgttagg
gttctagataggtttttggagttgggaatgaggaggttgaaaccggatgtagtcatggaa
agtggtgatgaagatgctcgggaggagagtaaggcggttttgggggaggttttgattgag
gaagaagaaatggtttgtttgaggaaggtgattatggattatgcggatgttttcgatgcg
ttatgtgggaatatccagaggcaattgaaaggattggagggaggtgatttggggatggct
ataatggtaagaagagaggataacgtgagagtggattcagtcgatgaggaacataagagg
gttcttggtttgatacaaaagaatgtgcagttagcccatttggatgctatcaagaattgt
gtgaaggatggggatattgaaggagcagtatcacttattcgttttcttcatcttgattat
ggggttgaggaggttgagtatcgcacactgctgcaagatctcctcaagagggttttatca
gaaatggaaagatttggagggtcccggcattccacagaagaaaagctgttacggatttat
ggagaatctctgtcatcaaattgcaggcatcttgttcaaatgattcaggttattcacgac
gggttgctttttcaagagattgagacgtatagagctcttgataacaaccaaattccacca
cctcttgagcattttcaaaagcatttagtggaatttaaacttgatgcagatttaaataac
gagcatttgcccttgaatatggcagcaagttcttgcctgagagacatgttccattatgct
cgtatttctgggttacatatactagagtgtgtgatgaatacagctttgtctgccataaaa
agggagcacattcaagaggcaacaaatgttcttgtactatttcctcggcttcggcccctt
gtagctgccatgggatgggatttgctgtctggtaaaacaatgttgaggcggaacttaatg
caattgtgttggagaagtaaatcaaaagtgtttcagctggaagaatcttctctttatgga
aattggccagatgaggtatcgtgtgtggaacatctttgtgattcactatgctaccacctt
gatattgcctctttcgtagcttgtgtaaattctggtcaaccatggagttcaaaattctca
ttactattgtctggagatgaaaatatagcatctggaagtgaaaatgctcagttagacaca
tttgttgaaaattttgtgttggaaagactttctgttcaaactccccttcgggtactgttt
gatgttgttccaggcataaaatttcaggatgctattgaattgattagcatgcagccaatt
gcttctactcttgaggcccagaaaaggatgcaagatattgaacttatgcacatgcgttat
gctttggaatcaactgttcttgcactaggagcaatgggaaggagcatgaatggtgaaaaa
gagactcatcaagtggcactctgtcatttgcaagacctaaagaaccacttggcaggcata
aaaaatattccacgcaagatactgatggtgaatgttataatttcacttttgcatatggat
gatatctctctcaatttgacacattgtgcctcacctgagagcctttttgaactacctgct
gaatgtgcttgggaacatattgatttaactacttatgaagggggaaacaaaatggttata
tctttcacagggttgttacttgatatagtacgtcataatcttccatcaagcatgactgag
gaggtatccaatgatggtttaagcatgtctgcaaggcaggccttggaatggagaatctca
atgggtcaaagtttcgttgaagatttggaatggcgattatcaattttgcagcgccttctc
ccattatctgaacggccatggagttggaaggaggcattgactatattacgagcagcccca
tccaagctacttaacctttgcatgcaaagagcgaaatatgacattggagaagaggcagtt
catcgattttcattatctgcagaagatagagccacccttgaattagctgagtgggtagat
agtgcatttagagaactgcatgtaagtgtagcaaaagcagtgtctcgtgcagctgatggg
acttctctggtacaggatctggatttttcttcattgcgctctcaattaggtcctttggct
acaattcttctgtgcattgatgttgctgcaacttcagcaaggtctgccaatatgtctcaa
cagcttctagatcaggctcaagttatgttatctgagatatatccaggaggttctccaaag
gtgggttctacttactgggatcagatccatgaagtcggagttatttctgtattacgacgt
gtcctcaaacgactgtatgagttcttggaacaggatagtcctccagcccttcaggccatt
ctgacaggggagatctctatttcatcaactaaggactctcatcgacagggacaaagagaa
cgtgctcttgcactgctacatcagatgattgaagatgctcatatgggcaagcgacaattt
cttagtggtaagcttcacaatctagcgagagctattgccgatgaagaaatggaagtaaat
ttcactaaaggagaaggaccaggtaccgataggaaagtacagtccagtcttgacaaggat
ggggttcttgggcttgggttaaaagctgtcaaacagacatcatcaacttccatggctgga
gatagtagtatgcagcctgttggttatgatatgaaggatagtgggaagagactgtttggt
cctttaagtgcaaagcccacaacctatttatcacaatttattctccatattgctgcaatt
ggtgacatagtggatggaacagatacaactcatgattttaactttttctcacttgtatat
gagtggcctaaagatcttttaactcgtttggtcttcgaccgaggcagcacagatgcagct
ggcaaagtagcagaaataatgtctgctgactttgttcatgaagtgatttcagcatgtgta
cctccagtttatcctccgcggtctggtcatggatgggcatgcattcccgttattcccaca
tgtcctactagttgttcagaaaataaagcactttctccttctgctaaagaagctaagcct
agctgttatagtcgttcctctgcaacacctgggatccctctgtaccctctccaactggat
ataataaaacatttagttaaaatatctcctgtcagggctgtcttggcatgtgtttttgga
agcagtatgttatacagcggcagtgactctagtatatctagctccttgaatgatgactta
atgcaggcccctgatgctgatcggttgttttacgagtttgctctcgatcaatctgaaagg
ttcccaactttgaatagatggatacaaatgcagactaaccttcaccgggtttcagaattt
gctgttacagctaggcaaagagctgatgatggcaaggttaaacccgaaacaagaactgtt
attaagaggctgcgtgaacctgatagtgacactgagtcagaagttgatgaaatcgttggt
aactctaacatctcaacatccttggacctcaatgctatagatagcatttctccagaccca
tggcatgattgcttaaaacctgaaacagctgaagttgatagtacagtttttctttctttt
ggtttggagaatgaagatccatatgagaaagctgtggaacgattgattgatgaaggaaaa
ctaatggatgctcttgcactctctgatcgctttctacgtaatggagcctcagaccggttg
cttcaactactaattgaacgtggagaagaaaaccattcaacctctgagcagtctcaaggt
tatggggggcatggcatctggagcaatagttggcagtattgcctgcggttgaaggataaa
caactggcagctggacttgccctcaagtgcatgcacagatgggaacttgatgctgctttg
gatgttctaaccatgtgcagctgccacctgcctcaaagtgatccagttaggaatgaggtc
ttgcaaagaagacaagctttgcagaggtacagccatatattaagtgtagatcatcaccat
ggaagctggcaagaggttgaagctgagtgtaagcaagatcctgaaggcttagcactaaga
ttagctgggaaaggagctgtttctgctgccttagaagtagctgaaagtgctggattatca
acagaattgcggagagaacttcagggccgacagcttgtgaagcttctgacagcagatcct
ttgaatggtggaggtcctgcagaagcttcacgttttttatcatcactacgtgactctgat
gatgctctaccagttgctatgggtgcaatgcagctattacccaacctacggtcaaagcaa
cttcttgttcacttcttcttgaagcgacgagatgggaatctgtcagatgttgaggtttct
cgacttaactcgtgggctttaggtcttcgtgttctggctgccttgccattgccatggcag
caacgatgttcttccttgcatgagcacccgcacttaatattggaggttctgctgatgagg
aaacaactgcagtcggcctctctgatccttaaagagtttccttcattgagagacaacagt
gtaatcatatcatatgctgccaaagctattgctgtcagtattagctctccaattcgggag
ccacggatatctgtttctggaacaaggccaaaaccaaaaccaagattaggtgtacctgca
aggtcatccttcactagtagtttaagcaacttgcaaaaagaggctcgtagagctttttct
tggactccacgtaatactggggacaagactgcctccaaagatgtttatcggaagagaaag
aattctggtttgtcaccttctgatagagttgtgtgggaagcaatggctgggattcaagag
gatcgtgtatcatcatatgcagatgggcaagaacggtttccttctgtctcaattgctgag
gaatggatgctaacgggtgatactggtaaagatgacattgttcgaacatctcacagatat
gaaagttcccctgacattattctcttcaaggcactgctttccttatgttctgatgagttt
gtgtctgccaaaagtgcccttgaattatgtgttaatcagatgaagtctgttttggggtcc
cagcagttgcctgagaatgcatctatggaaacaattggtcgagcatatcacgccacagag
acatttgtccagggactaatatatgctaaatcactgctgagaaaacttactgggggcaat
gatctcgccattaattctgaaagaagcagggatgctgatgatacatcctctgatgctggt
agctcgagtgttggtagtcagtccacggatgagttatctgaagttttgtcacaagcagat
gtttggctgggacgtgctgagcttcttcaaagtcttctagggtcaggaatagctgcttct
cttgatgatattgctgacaaggagtcatctgcccatctccgtgacaggttgattgttgat
gaacggtacagcatggctgtctatacttgcaagaagtgtaagattgatgtttttcctgtg
tggaatgcgtggggacttgctttgattcggatggagcactatgcacaagctcgtgtaaag
ttcaagcaagctcttcaattgtacaagggtgatcctgcaccagttattactgagatcatt
aatacaatggaaggaggcccacctgtggatgtatcagctgttcgttccatgtatgaacat
ttggccaaaagtgcaccaacaatcttggacgattctctttctgctgattcatatctcaat
gttctgtacatgccatctaccttccctcgttcagagagatcaaggcggtctcaagaatcc
acaaatagtaattccccatatggccctgactgtgaagatggaccacgtagcaacttggac
agcgctcgttatgttgagtgtgttaactatttgcaagaatatgctcgtcagcatttgctt
ggatttatgtttaaacatggtcacttcaacgatgcttgcttgttattctttcctcttaat
gctgttcctccacctgctcaaccttcgacaatgggagtagtaacttcatcctcgtcccct
caaagaccagatcctttggcaactgattatgggactattgatgatttgtgtgacttgtgc
attggctatggtgctatgccggtcttagaggaagtgatttcaacaagaatttcagttgca
aaacaacaggatgcattagtaaatcaatatacagctgctgcacttggtcgtatttgcacg
tattgtgaaactcacaggcatttcaattatctatacaagtttcaggtaatcaagaaggac
catgttgcagctggactctgttgtatccagttattcatgaattcttcttctcaagaggaa
gctatcagacatttggaacgtgctaagatgcattttgacgagggattatcagcacgatcc
aagggtggagaatctaccaagcttgtcatgaagggtgtcagaggaaaaagtgcctctgag
aagcttacagaagaaggacttgtcaagttttcagctagagtgtccatccaggtggaagtt
gtgaaatcctttaacgacccagatggaccacagtggagacattcactttttggaaatcca
aatgatctagaaaccttcaggaggaggtgcgagattgcagaaactcttgttgagaggaac
tttgatttggcatttcaagtgatatatgaatttaatcttccagctgttgatatatatgct
ggtgtggcttcatcacttgctgaaagaaaaaggggcagccagttgactgaattttttaga
aacataaaaggaacaattgatgatgatgattgggatcaggtcttaggggctgctattaat
gtgtatgctaatagacacaaagaacgccctgatcgtctcatagacatgctcaccagcagt
cacaggaaagtgctggcatgtgtggtttgtggtcgcctaaaaagtgccttccagattgct
tctcgaagtggaagtgtggctgatgtccaatatgttgcacaccaggcgttacatacaaat
gccctccccgtgctagatatgtgtaaacaatggctgtctcagtacatgtaa
DBGET
integrated database retrieval system