KEGG   Theobroma cacao (cacao): 18587916
Entry
18587916          CDS       T02994                                 
Name
(RefSeq) helicase and polymerase-containing protein TEBICHI
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
tcc  Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tcc03400]
    18587916
Enzymes [BR:tcc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     18587916
DNA repair and recombination proteins [BR:tcc03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    18587916
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII Helicase_dom4_arc HHH_5
Other DBs
NCBI-GeneID: 18587916
NCBI-ProteinID: XP_017982777
UniProt: A0AB32WU03
LinkDB
Position
9:1932461..1949026
AA seq 2170 aa
MASGSPRARIDQFFASKKRKTQSPGLKTGRFEKNAKTTVEGSPSAKGTLDNYLRTSQENE
IVQPSCTILGQDPVKRSLASEIDKSSENENEQSFLLAEVKSRSCEAFQVTHNGIYLGSSE
EGNFDFGDPAEVAAQGRENSELKQFATDFLSLYCSEVQPHVGSPSQLKANDQKRHGSLSM
LSEEDKRFKKRYLISHQLQTEVETACSTKKNLKNETGEFILNLSREVNTGSNLIELQASL
RKCTTTTKPVLNTMECSTPGSSIVKACAYQTPQSMRGSSMFSPGEAFWNEAIEIADGLFS
RSDALSAQVAGETNNPKSQYEINNTYNLGNKIVDYKSKEMPDECESRVKLKGVGTSLESA
VKQKKEMDKEVSLLPVKHLDFSFDDKILDGSIPHIIQRDSKVTECGIVNHKGPSIVNTLT
DHDELQTIEEVQGEQQERASVHVVPKKEDNLSSQDNNSITSTSAANKANKSIGECNETTT
PLSFVALKDRLSLSSWLPLEICRTYKKKGISELYPWQVDCLQVDGVLQRKNLVYCASTSA
GKSFVAEILMLRRVILTGKVALLVLPYVSICAEKAEHLEVLLEPLGKQVRSYYGNQGGGT
LPKDTSVAVCTIEKANSLINRLLEEGRLSEVGIIVIDELHMVGDQSRGYLLELLLTKLRY
AAGEGMSESSSGESSGSSSGKADPAHGLQIVGMSATMPNVEAVADWLQAALYQTDFRPVP
LEEFIKVGNTIYDKNLDIVRTIPKVVDLGGKDPDHIVELCNEVVQEGHSVLIFCSSRKGC
ESTAKHVSKFLKKFSVNVHGDNCEFVDISSAIDALRRCPAGLDPILEETLPSGVAYHHAG
LTVEEREIIEACYRRGFVRVLTATSTLAAGVNLPARRVIFRQPRVGRDFIDATRYKQMAG
RAGRTGIDTKGESMLICKPEEIKRIKGLLNESCPPLQSCLSEDKNGMTHAILEVVAGGMV
QTASDINRYVKCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNDETKLYGTTPLGRAAF
GSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLVTPINVEVEPDWELYYERFMELSALE
QSVGYRVGVAEPFLMRMAHGAPIHISNGLRDGWKRLRGKFENHLGISNNTKLSNEQTLRV
CKRFYVALILSRLVQEAPVGEVCEAFRVAKGMVQALQENAGRFASMVSVFCERLGWHDLE
GLVAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASIPDIFKALFE
SSSWAAQESSAQRRMQLGVAKKIKNGARKIVLNKAEEARIAAFSAFKSLGYSVPQFSRPL
VLNGSPGEQEAAITSVGDDSPGSVVWVEQIEHVLAKPLAERSKNLENVSSANEGLIVTKT
SADNLVASAEVNLATTLQCNLGMENPGVSVEGPVTGDEVNAAIDRGRSIVMATVCGYLDQ
GVHDGLNEDLCVGNVDSACRKGPLNAVNTPGGIDSFLELWETTAEFCFDIHYNRRSEPNS
VASFEVHGIAICWENSPVYYVNLPKDLIWSDNRTNNFLSTCASSDKNDSLPPQHFLEMAK
LRWKRIVDIMGKSGVRKVSWNLKVQIQVLKSPAISVQRFGGMNLGVKDLGLEIIDNSYLL
FPPVLINDGIDMSIAAWVVWPDEERSSSPNLEKEVKKRLSSEAAAAANQSGRWKNQMRRA
AHNGCCRRVAQTRALCSTLWKLLISEKLIEAFTYIETPLVNVLAEMELWGIGINMEGCLW
ARNVLGKKLRCLEKEAYKLAGMTFSLYTAADIANVLYGHLKLPVPEGRNKGKQHPSTDKQ
CLDLLRDEHPIIPVIREHRTLAKLLNCTLGSICSLARLSRSTHKYTLHGHWLQTSTATGR
LSMEEPNLQCVEHMVEFSLSKDKNGSDANVDHYKVNVRDFFVPTQDDWLLLTADYSQIEL
RLMAHFSKDSALIELLSKPQGDVFTMMSAIWTGRAEDSVSSNERDQTKRLIYGILYGMGA
DTLAEQLNCTTDEAKEKIKSFKSSFPGVASWLCESISSCRQKGYVETLKGRKRFLSKIKF
GNSKEKSKAQRQAVNSICQGSAADIIKIAMIKVYSLIVEGVGRLDSGSSISTKFQMLKGR
CRILLQVHDELVLEVDPFVIKEAAWMLRMSMESAVSLLVPLRVKLNVGKTWGSLEPFLAD
QGIEEAVSKS
NT seq 6513 nt   +upstreamnt  +downstreamnt
atggcttcaggttcgcctcgagcccgcatcgatcagttttttgcctcgaagaagaggaaa
acccaatcacccggtttgaagacagggagatttgaaaagaatgcaaaaactacggtcgaa
ggctctcctagtgccaaaggcactctagacaattacctaagaacttcacaagagaatgaa
atcgtgcaaccttcatgcacgattcttggacaggatcctgttaaaagaagcttggcatcg
gagattgataaatcttccgaaaacgagaatgaacagtcctttttgttggctgaagtgaag
tctcgaagttgtgaagcatttcaagtgactcataacggaatatatctgggttcatctgag
gaaggaaattttgactttggagatcctgctgaggtggctgctcaaggcagggaaaattca
gaactaaaacaatttgctactgattttttgtctttgtattgtagtgaagttcaaccacat
gtaggttcaccatcacagctgaaagcgaatgaccagaagagacatggtagtctatctatg
ctgagtgaggaggataaaagattcaagaaaagatatctgatatcccatcagttacaaaca
gaagttgaaactgcttgttctactaagaagaatctcaaaaatgaaactggagagttcatt
ttgaacctttcaagagaggtaaacacgggtagtaatctcattgagcttcaagcaagctta
agaaaatgcactacaacaaccaaaccggtcctaaatacaatggaatgcagtacacctggt
tcttcaattgttaaagcatgtgcttatcaaacaccgcagtcaatgcgagggagctccatg
ttttcgcctggggaagctttctggaacgaagcaattgaaatagctgatggtttgttttct
cgaagtgatgcattatctgctcaagttgctggagaaactaataatccaaagagccaatat
gagattaataatacatacaatttaggaaataaaattgttgattacaagtcaaaggaaatg
ccagatgaatgtgagagcagagtgaaacttaagggagttggtacttctttggagtcagca
gtgaagcagaagaaagaaatggataaagaagtgtccctgctgcctgttaagcatcttgac
ttttcatttgacgacaaaattttggatggaagtatccctcacattatacagagggacagt
aaagtgactgaatgtggtattgtcaatcataaaggtccatcaatcgttaatacactgaca
gatcatgatgaacttcagacaattgaagaggtgcaaggagaacaacaggaaagggcttct
gttcatgtggtacccaaaaaggaagacaatttgtcaagtcaagataataatagcataact
tccacttcagcagctaataaagccaataagtcaattggtgaatgcaatgaaaccactact
ccattaagttttgtggcgcttaaagaccggttaagtctcagtagttggcttcctttagaa
atatgcagaacatataaaaagaaaggaatttcagaactatatccatggcaggttgactgc
cttcaggtagacggtgtactgcagagaaagaatcttgtatattgtgcttctacaagtgct
ggtaaaagctttgtggcagaaattttgatgttgcggagggtgatattaactggaaaagta
gcgttacttgttcttccttatgtttcaatctgtgcagaaaaggcagaacatctggaggtc
cttcttgaaccacttggcaaacaagttcgtagttattatggaaatcagggtggtggaaca
cttcctaaagatacttctgtagctgtttgtacaatagagaaggcaaactctttaattaac
agattgctcgaagagggtcgtctatcagaagttggaatcattgtgatagatgaactacac
atggttggtgatcagagtaggggttatcttctggaacttctgttgacaaagcttcgttat
gcagctggggaaggcatgtcagaatcaagtagcggagaaagttcaggttccagtagtggt
aaggctgatccagctcatggtttacaaattgtagggatgagcgcaacaatgccaaatgtg
gaagctgttgccgactggcttcaagcagcattgtaccagacagattttcgaccagttcca
ttggaggaatttataaaagttggcaacaccatttacgacaagaatttggacatcgttaga
acaattccaaaggttgttgaccttggtggtaaagatcctgatcatattgtcgaattgtgc
aatgaggttgttcaagagggtcattcagtgttgatattttgttctagtcggaaaggatgt
gaatcaactgcaaagcatgtgtcaaaatttctcaagaaattttctgtcaatgtccatggt
gataactgtgagtttgttgatatttcttcagcaattgatgccttgcgaaggtgtcctgct
gggttggatccaatattggaagaaactcttccttctggtgttgcatatcaccatgctggc
cttacagttgaggaaagagagattattgaagcatgctatcgtagagggtttgttcgtgtc
ttaactgccacatcaaccttagctgctggtgtcaacctacctgctaggagagtcattttt
cgacaaccccgggttggccgtgattttattgatgcaactagatacaaacagatggctggt
cgggctggtcgaactggtatagatacaaaaggagaaagtatgcttatttgcaagccagaa
gagataaaaagaattaagggacttcttaatgaaagctgcccaccattgcaatcttgttta
tctgaagataagaacggaatgactcatgcaattttagaagttgtggccggtggaatggtt
caaactgctagtgatattaaccgctatgttaagtgtactcttctcaattctacaaaacca
tttcaagatgtggtgaaatcagctcaggattcccttcggtggctgtgtcacagaaaattt
cttgaatggaatgatgagaccaagttgtatggtactactcccctcggacgtgcagctttt
ggcagttccctttgcccagaggagtcactgattgtgttggatgatctttcaagggccaga
gaaggcttcgtgcttgcttctgatttacatttagtttatctagtaacaccaatcaatgtt
gaagttgaaccagattgggaattgtattatgaacgcttcatggaattgtctgctcttgaa
cagtctgttggttatcgagttggagtagcagaaccatttttgatgcgcatggcacatggt
gcgcctatccacatttcaaatggattaagagatggttggaagaggcttcgcggaaagttt
gaaaatcaccttgggatcagcaacaacactaagctttcaaacgagcaaacacttcgagtg
tgcaaaagattttatgttgccctcattttatcaagattagtgcaggaagctccagtaggt
gaggtttgtgaagcttttcgagtggcaaaaggcatggtacaagccttacaagagaatgct
ggaaggtttgcgtcaatggtttctgtgttttgtgagaggcttggatggcatgacctagag
ggcttggttgcaaagttccaaaatcgtgtttcttttggagtcagagcagagattgtagag
cttactactattccatatgtgaaggggtcacgggcaagagctctttataaagctggtttg
cgcacacctcttgcaattgcggaggcatctattcccgatatttttaaagctctttttgaa
tcctcatcatgggctgcacaagaaagttcagcacagcggcgcatgcaattgggagtggca
aagaagatcaagaatggtgcgcgtaaaattgttcttaacaaagctgaagaggcgaggatc
gctgccttctcagcttttaaatcgcttggatatagtgtcccacaattttctcgaccattg
gtattgaatggcagtccaggagaacaggaagctgcaattaccagtgttggggatgactct
cctggtagtgttgtttgggttgagcaaatagagcatgtgttagccaagccactagcagaa
agaagtaagaatttggagaatgtttcttcagctaatgaaggtttaatagtgacaaaaacc
tcagctgataacttagtggcttcagcagaagtaaacttagctactaccttgcaatgtaac
ttgggtatggaaaatcctggagtttcagttgaagggcctgtaactggtgatgaggtcaat
gccgccattgatcgaggcagaagtatagtgatggcaacagtttgtggatatttggatcaa
ggagtgcatgatgggctcaatgaagatctctgtgttggcaatgtggatagtgcttgtagg
aaaggtcctctaaatgcagttaatactccaggtggaattgattctttcctggaactgtgg
gagactacagcagaattctgttttgatattcactacaacagacgatcagaaccgaactct
gttgcttcctttgaggtacatggcatagcaatctgttgggaaaattctcctgtgtactat
gtaaatttgcccaaggatttaatctggtctgacaacagaacaaacaatttcttgtcaaca
tgtgcatctagtgataaaaatgatagcctacctcctcagcattttttggagatggctaaa
ctgagatggaagagaattgttgatataatggggaaaagtggtgttcgcaaagtttcttgg
aacttgaaagttcagattcaagtgcttaaaagtcctgcaatttctgttcagagatttggt
ggcatgaatcttggagtgaaagatttgggtctagaaattattgacaactcatacttgtta
tttccaccagttctgattaatgatggaattgatatgtccattgcagcatgggttgtttgg
cctgatgaggagagaagctctagtcccaacctagagaaggaagtaaagaaaaggttatcc
agtgaggctgctgcagctgctaatcagagcggtaggtggaagaatcagatgcgaagagct
gcacataatggttgctgccgtcgagttgctcaaacacgtgccttgtgttctacactttgg
aagttactcatctctgaaaaacttatcgaagcgtttacatatattgaaacaccattggtt
aatgtccttgctgagatggaactttggggaataggcatcaacatggagggatgcctctgg
gcacgaaatgtgttggggaaaaaactaagatgtcttgagaaggaagcttataagttggct
ggcatgacattttcattgtacacagcagctgatattgcaaatgtcctgtatgggcacttg
aagttgcctgtgccagaggggcgcaataaaggaaaacaacatccaagtactgacaaacag
tgtttggatctactgagggatgaacatccaattattccagtcattagagagcatcgaaca
ttggcaaagctcttaaactgtacactgggatccatttgttcactagctaggctgtctcgg
agtacgcacaaatacacactacatggccactggctccaaacatcgacagcaacgggacgt
ctttcaatggaggaacctaatcttcagtgtgtcgagcatatggttgaattcagcctgagc
aaagataaaaatggaagtgatgccaatgttgatcactataaggttaatgtccgtgacttc
tttgttcctactcaggatgactggttactattaacggcagattattctcaaatagaactg
cggttgatggcccacttctcgaaggactctgcgttaattgaactcctaagcaagccgcag
ggtgatgtttttaccatgatgtcagcaatatggactgggagggctgaagattctgtcagc
tccaatgagcgagaccaaaccaaaaggttaatctatggcattctttatggaatgggtgct
gacactcttgctgaacaactaaactgcaccacggatgaagctaaagaaaaaattaaaagc
tttaaaagctcttttcctggtgttgcatcctggctttgtgaatccatttcatcttgtcgt
caaaagggatatgtagaaactcttaagggaagaaagcgcttcttgtccaaaataaaattt
ggaaacagtaaagaaaaatcaaaagctcaaaggcaagctgtgaattctatttgtcaggga
tctgctgctgacataatcaaaatagcaatgataaaagtgtattctctgattgttgaaggg
gttggtaggctagactctggctcttcaatttctactaaatttcaaatgcttaagggccgg
tgcagaatccttttacaggtgcatgatgaattagtactggaagttgatccctttgtgata
aaggaagctgcatggatgctgcgaatgagtatggaaagtgctgtctctcttctggttcct
ttgcgtgtcaaactgaatgttggaaagacatggggctctttggagccttttcttgctgat
caaggaattgaggaagctgtgtccaaatcttag

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