Theobroma cacao (cacao): 18588019 Help Entry 18588019          CDS       T02994                                  Name (RefSeq) RNA polymerase sigma factor sigC   KO K03093   RNA polymerase sigma-I factor Organism tcc  Theobroma cacao (cacao) Brite KEGG Orthology (KO) [BR:tcc00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:tcc03021]     18588019 Transcription machinery [BR:tcc03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      18588019 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 KARI_N Motif Other DBs NCBI-GeneID:  18588019 NCBI-ProteinID:  XP_017983625 UniProt:  A0AB32X0V5 LinkDB All DBs Position 9:complement(2503021..2509160) Genome browser AA seq 536 aa AA seqDB search MGFRLNLKGVCPVPSHFLASSPSRLPSSGVLSLKDPLKAYASSAAPQTLEKGCLEIEEMK VNIGKGSQSHSHSLTMIDKTHELIGGDKSSSRTSPQACKASHYSLLMENLDVLEETFADS DVLTLEREILLQLGRLGALKLFNTCLSRTLKASNILDLSDVPANSGDCNMNLSVDGQKDK TVVCSRKKKQRKKIRERALENPTIISTQLLPSNTLHGRFQKPKVSSAKRVSDSRSRRLRI ARNEAEMSKGVKVVANLERIRTTLEEETGRAASLSCWAEAAGVSEKVLQQHLRFGWYCRD ELLRSTRSLVLYFARNYRGLGIAHEDLIQAGSLGVLQGAERFDHTRGYRFSTYVQFWIRK SVSRIVTRHARGIQVPCTLSRAIVQIQKARKALSKSHGKYPDEDAIAKFTGLSLAKIRSA NKCMRVVGSIDQKIGDCMNAKYLEFIPDLSVRSPEKTVMRQHMKEDIHDLLNGLDARERQ VMVLRYGLKGSPPKSLEEIGRLFHVSKEWIRRIEMKAMKNLRDKETCRNLSHYLDS NT seq 1611 nt NT seq  +upstreamnt  +downstreamnt atgggtttcaggctgaatctcaagggggtttgcccagttccttctcattttcttgccagt tcaccttcgaggctcccttcttctggtgtgctttcgttaaaagatcctctgaaggcatat gcttcatccgcagctccgcaaacattagaaaaaggttgcttggaaattgaagaaatgaag gtaaacattggcaagggatcacagtcacacagtcattcacttactatgattgataaaact catgaactaattggaggggacaaatcttcctctcgcacaagcccacaagcatgcaaggct tcacattatagtttgctaatggagaatctcgacgttttagaggagacatttgctgattca gatgtgttaacattggagagggaaattctactacaactaggaaggcttggagctctgaaa ttattcaacacatgtctctctaggactcttaaagcttcaaatattttggacctatctgat gttcctgctaatagtggagattgtaatatgaatctctcggtggatggtcaaaaggataaa actgttgtttgctctagaaaaaagaaacaacgcaaaaagataagagaaagggcactagaa aaccccactataatttctacccaattgctgccatcgaacaccctgcatggacgctttcaa aagcccaaagtttcttctgcaaaaagagtgtcagactctagaagtagaagattgagaatt gctagaaatgaagcagaaatgtcgaagggagtgaaggtggttgcaaacttggagagaatt agaacaactttagaagaggaaacgggtagagcggcaagcttgagttgctgggcagaagca gccggagttagtgagaaggtgctgcaacagcatttgcgttttggttggtattgcagagat gagcttctaaggagtactcgctctttagtcctctactttgcaaggaactataggggtctg ggaatagcccatgaagatttaatccaggcgggaagtttaggcgtcttacaaggtgcagaa cggtttgaccacacaaggggatacagattttctacctatgtacagttctggataagaaaa tcagtttcaaggatagttacacgtcatgctagagggattcaagttccttgcacgttaagc agggcaatagttcagatacagaaagctcggaaggcccttagcaaaagccatggcaaatac ccagacgaggatgcaattgccaagttcacgggactttctttggctaaaatcagatcagct aataaatgcatgagagttgtgggttcaattgaccagaaaattggagattgtatgaatgca aaatatttggaatttatccccgatttgtcagtaaggagcccagaaaaaactgtgatgagg cagcacatgaaggaagatattcatgatcttttgaatggtttggatgcaagagagaggcaa gtgatggttttacgttatgggctcaagggctctccccctaagtctcttgaggagatcggg aggctctttcatgtgagcaaagagtggataagaaggatagagatgaaagcaatgaaaaat ttgagggataaagaaacgtgcagaaatttaagccattatttggattcatag

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