Theobroma cacao (cacao): 18588391
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Entry
18588391 CDS
T02994
Name
(RefSeq) zinc finger CCCH domain-containing protein 64
KO
K24939
CWF19-like protein 1
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcc03041
]
18588391
Spliceosome [BR:
tcc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
18588391
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CwfJ_C_1
CwfJ_C_2
zf_CCCH_4
Torus
zf-CCCH
zf-CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
18588391
NCBI-ProteinID:
XP_007012827
UniProt:
A0AB32UPP5
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Position
9:4589893..4595766
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AA seq
613 aa
AA seq
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MAPPRILLCGDVLGRLNQLFKRVNSVNKSAGPFDSLFCVGQFFPDETDRLEELMDYVEGR
AQIPLPTYFIGDYGAGAAKVLSAASKNSANQGFKMDGFKICDNLFWLKGSGKFTLHGLSV
AYLSGRQLSSGQQFGSYSEDDIDALRAFAEEPGIVDLFLSNEWPSGVTNRATASDIPAGM
SNSSGSDSTVSQLVAEIKPRYHIAGTKGAFYAREPYSNVDAVHVTRFLGLASVGNKEKQK
FLHALSPTPSSAMSAAEISAKPPNTTLSPYTLADQVDRPKEATMRAGDNAPDSQYWRYDV
SNKRQKHGNGDGNKVCFKFISSGSCPRGEKCNFQHDVDAREQFLRGVCLDFIIKGKCEKG
PDCNFKHSLQDEGESYSRKRPGSGNNSANRLKECWFCLSSPNVEIHLVTSIGENFYCALA
KGPLVQDHVLLIPVEHLPNTLCLSADSEIELGKFQNSLKMYYKNQGKEAVFFEWISKRGT
HANLQAVPVPSSKAAALKDIFNLAAEKLGFEFVTKKFNNNSEGRKWLKTQFDKNFSCFYV
ELPEGSILSHLVEENEKFPAQFGREVLAGLLNMADRADWRNCTLGKEEETKLAENFKKLF
DVFDPSQRLLKRM
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggctcctccacgaatactactatgtggcgatgttttaggccgtctcaaccagctcttc
aagcgagtcaactcagtgaacaaatcagcgggtcctttcgattctcttttttgcgtgggc
cagttctttccggacgaaacggaccggctcgaagaattaatggattatgtcgaaggccgg
gcccaaattccgctcccaacttactttatcggcgattacggcgccggtgcggccaaggtt
ttgtcggccgcttcgaagaactctgccaatcaaggatttaaaatggacggtttcaagatt
tgcgacaatttgttttggttaaaaggcagcggcaagttcactctccatggtttgtctgtt
gcttacttatctggtaggcagttgtctagtggtcaacagtttggatcatatagtgaagat
gacattgacgcgttgcgagcattcgcagaggaacctggaatagttgacttgtttttaagt
aatgaatggccaagtggtgtcacaaatagagctactgcatcagatattcctgcaggaatg
tcgaattcttctggtagtgattccactgtatcccaattagtcgcagagatcaaaccacgc
tatcacattgcaggtactaagggtgcattttatgctcgcgaaccttattctaatgttgat
gctgtgcatgtaactcggttcttgggtcttgcttccgttgggaataaagagaagcagaaa
tttcttcacgcactttctccaactccatcatctgctatgtcagctgctgagatcagcgca
aagccaccaaatactaccttatcaccatacacattagcagaccaagtagatcgtcctaaa
gaagccacaatgagggctggtgataatgctcctgattcacaatattggagatatgatgtc
tcgaacaaacggcaaaagcatggaaatggagatggtaataaggtgtgttttaaatttata
tcttctgggagctgtccacggggagaaaagtgcaactttcaacatgacgtagatgcaagg
gagcaatttttgagaggtgtttgccttgattttataataaaaggaaaatgtgaaaaaggt
ccagattgcaactttaagcacagtttacaggatgaaggtgagagttactctcgtaagaga
cctggatctggcaataatagtgctaacaggttgaaagagtgctggttttgtttgtctagc
ccaaatgtggagatacatctggtgactagcataggagagaatttctattgtgcactagca
aaaggcccacttgtccaagatcatgtcctgttaattccagttgagcatttgccaaataca
ctttgtttatcagcagatagtgagattgagctgggaaaattccagaacagtctcaagatg
tattataaaaaccagggaaaggaagctgtgttctttgagtggatatcaaaacgtggcact
catgccaaccttcaggctgttcctgttccatcatccaaagcagctgctcttaaagacatt
tttaatttggcagctgaaaagttgggttttgaatttgttaccaaaaaattcaacaataat
tctgaggggagaaaatggttgaagacacagtttgataagaattttagctgcttctatgtg
gaactccctgaaggttcaatcctatcacatttggttgaggagaatgaaaagtttcctgcc
caatttggacgtgaggttctggcaggcctactgaacatggcagatagagctgattggagg
aattgtacacttgggaaagaagaggaaacaaagctggcagagaatttcaaaaaactgttt
gatgtatttgatccgagtcaaagacttttaaaaaggatgtga
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