Theobroma cacao (cacao): 18588659
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Entry
18588659 CDS
T02994
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18588659
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tcc01009
]
18588659
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18588659
03036 Chromosome and associated proteins [BR:
tcc03036
]
18588659
Protein phosphatases and associated proteins [BR:
tcc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
18588659
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
18588659
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
18588659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Ribonuc_red_lgC
Sec7-like_HUS
DUF5954
Motif
Other DBs
NCBI-GeneID:
18588659
NCBI-ProteinID:
XP_007013281
UniProt:
A0AB32X0M7
A0A061GLZ6
LinkDB
All DBs
Position
9:6210785..6215013
Genome browser
AA seq
506 aa
AA seq
DB search
MLKQILSKLPRKSQKSDSLDSAGIDSGNQTSNSGNGVQCTNIGNSISSRLSVVKRVSSAV
FPASIMAGVEAVEPNLSFKDVSNPQKQNLFISKLNLCCEVSDFSDPDKTNAEQDLKRQTL
IELVDFVSSGSAKFNEPAIAAMCKMCAINLFRVFPPKYRSNSTSGEAEDEEPMFDPAWSN
LQLVYDLLLRFISYSSLDAKVAKKYVDHSFILRLLDLFESEDPRERDCLKTILHRIYGKF
MVHRPFVRKAVSNIIYRFVFETERHNGIAELLEIFGSIISGFAVPLKEEHKMFLWRALIP
LHKPKSVGVYHQQLTYCVVQFIDKDPKLANSVIKGLLKYWPVTNSQKELMFISELEEILE
MTSMAEFQKIMVPLFRRIACCLNSFHYQVAERAHLVWNNEHILNLVTHNRQVIFPLIFPA
LERNSQNHWNQAVLNLTQNIRKMLCEMDEELVLTCQCKLEEENSQLSEAAEKRKLTWERL
ESAAGFQPAAANMIPPVKPAACPVAC
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaacaaattctaagcaaacttccacggaagtcacaaaaatctgattcattagat
tcagctggaattgattctggcaaccagacttctaattcaggcaatggagttcaatgtacg
aatattgggaatagtatatcaagtcgattaagtgttgttaaacgggtgtcctcagctgtt
tttcctgctagcatcatggctggagtggaggcagtggagcccaatctatctttcaaggat
gtttctaatccacagaagcagaatctgtttatcagtaaattgaatctgtgttgtgaggtt
tctgatttcagtgatccagataaaactaatgctgagcaggatcttaaacgtcaaacattg
atagagcttgtcgattttgtttcttcgggttctgcgaagttcaatgaaccagcaattgct
gcaatgtgtaaaatgtgtgccattaacctgttcagagtttttccacctaaatatcgctct
aatagcactagtggtgaagcagaagatgaagaaccaatgtttgatcctgcctggtcaaat
ttgcaacttgtatatgatctacttcttcggtttatcagttatagctctctagatgcaaag
gtggcaaaaaagtatgtagatcattcttttattttgagattacttgacctctttgaatct
gaggacccccgagaaagagactgtttgaaaacaattctccataggatttatggaaaattc
atggtgcacaggccctttgttcgcaaagctgttagcaatatcatctatcgttttgttttt
gaaactgaaaggcataatggtatagcagagctcttggagatttttgggagtattatcagt
gggtttgctgtaccattgaaggaggagcacaagatgttcttgtggagagcccttattcct
ctacacaaaccaaaatcagtgggtgtttatcatcagcaattaacatactgtgttgtacag
tttatagacaaggatcccaagttagctaatagtgtgataaagggactgttaaagtactgg
ccagttacaaatagccagaaggagttgatgtttataagtgagttagaagagattttggag
atgactagcatggccgagttccaaaagatcatggttccactgtttcggcgtattgcatgc
tgcttaaacagcttccactaccaggttgctgaacgagcccacttggtatggaacaatgag
cacatcctcaatcttgttacgcataatcgccaggtgatttttcctcttatatttccagcc
cttgagcggaattcccagaatcattggaaccaagcggtgcttaatttgacacaaaatata
agaaaaatgttatgtgagatggatgaagagcttgtgcttacctgccagtgtaagttggag
gaagaaaactctcaattgagtgaggcagctgagaagaggaaactaacatgggaacgcctg
gaaagtgctgctggtttccaacctgcagctgctaacatgatacctcctgtaaaaccagct
gcatgccctgttgcctgttaa
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