Theobroma cacao (cacao): 18588680
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Entry
18588680 CDS
T02994
Name
(RefSeq) protein argonaute PNH1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18588680
03036 Chromosome and associated proteins [BR:
tcc03036
]
18588680
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
18588680
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
18588680
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
18588680
microRNA pathway
RISC loading complex
18588680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
18588680
NCBI-ProteinID:
XP_007013311
UniProt:
A0AB32UQ87
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All DBs
Position
9:6350516..6362021
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AA seq
943 aa
AA seq
DB search
MASQLHEMPHMHMRDLKENHVVSREPLKSSMNQKKSPQMIIKSGDRFEDGKKSLGRKNGR
RRVRGHKVDRLQDAKLESSMGSIPCKSLMFHRRPGYGQLGTKCMVKANHFLAEIPGSDLS
HYSVEINPEVASRKLNKAIMTELVKLHRNSDLGMRLPVFDGRKNLYTAGSLPFTSKKFNV
ILADDDEGTGNARRREFKVTIKFVALASMAQLSNLLSGIQVDTPQEALNIIDTVLRELAA
QRYISVGRFLYSPHIKKPQALGGGLESWRGFYQSIRPTQMGLSLNIDMSTTAFIEPLPVI
DFVAQILGKDVYSRPMSDADRVKVKKALRGVKVEVTHRGNVRRKYRVSGLTTQPTRELSF
PLDEHMNMKSVVEYFQEMYGYTIRYAHLPCLQVGNEKKVNYLPMEACKIVEGQRYTKGLN
EKQITSLLKVSCQRPREQELDILQTVHQNNYDQDPYAKEFGISIDSKLASIEARVLPAPW
LKYNDTGKEKEYLPQVGQWNMMNKKVINGSTVRYWACINFSRSVQESTAHCFCQELVQMC
QVSGMEFNRDPVIPIYSARPDQVKKALKYVYHAAENKLEGKELELLIAILPDNNGSLYGD
LKRICETDLGLISQCCLTKHVFKIGRQYLANLSLKINVKMGGRNTVLLDALSWRIPLVSD
IPTIIFGADVTHPESGEDSSPSIAAVVASQDWPEVTKYAGLVCAQPHRQELIQDLFKTWQ
DPQRGTVTGGMIRELLLAFKKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASL
ESTYQPPVTFIVVQKRHHTRLFASNHSDRSSTEKSGNILPGTVVDSKICHPTEFDFYLCS
HAGIQGTSRPAHYHVLWDENNFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYR
ARFYIEPEATENAKGRCTRTSNGSSVRPLPALKERVKNVMFYC
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacagctacatgaaatgcctcacatgcatatgagagacctgaaggagaaccat
gtggtgtcaagggaacctctaaagagttccatgaatcagaagaaatcaccccaaatgatc
atcaaaagtggggatagatttgaagatggcaagaagagtctgggaaggaaaaatggaagg
agaagagtcagaggacataaagtagataggttacaagatgcaaagcttgagtcaagcatg
ggttctattccatgcaagagccttatgttccacagaaggcctggctatggccagttggga
actaagtgtatggttaaagccaaccattttcttgctgagataccaggttctgacttgagt
cattatagtgtagaaataaacccggaagttgcttctcgtaaactgaacaaagctattatg
acagagctagttaaacttcacagaaacagcgacttggggatgaggcttcctgtttttgat
ggaaggaaaaacctatacacagcaggatcactgccttttacctctaagaagttcaatgta
atattggctgatgatgatgaaggaacgggcaatgctaggagaagggaatttaaagtgaca
ataaagtttgtagctctcgctagcatggcacaattgagcaacctgctttctgggattcaa
gttgatacccctcaagaagcccttaatattatcgatactgtgttaagggaacttgcggct
caaaggtacatatcagttggaaggttcctttactctcctcatatcaagaaaccacaagca
ctgggaggtggcttagaatcatggcgcggcttctaccagagtataagacctactcagatg
ggattgtcactgaacattgatatgtcaacgactgcattcattgaaccactacctgtcatt
gattttgttgctcaaattttgggtaaagatgtgtattcaaggccaatgtcagatgcagat
cgtgttaaggttaagaaagccctcagaggtgtaaaagtggaagtgactcacaggggaaat
gtacgcagaaagtacagggtttcagggttgacaactcagccaacaagggagctaagtttc
ccacttgatgagcatatgaacatgaaatcagttgttgagtactttcaagagatgtatgga
tatacaattagatatgcacacctaccttgccttcaagtaggaaatgagaaaaaggtgaac
tacttgcccatggaggcttgcaagatagttgaaggacagagatatacaaaagggctgaat
gaaaaacagattacttctctgctaaaagtttcctgccaaagacctcgtgaacaagaattg
gatatcttacagacagttcatcaaaataattatgatcaagatccttatgcaaaagagttt
ggcatcagcatagacagcaagcttgcatcaattgaggctcgggttcttcctgctccatgg
ctgaagtataacgatactggaaaagaaaaagaatatttgcctcaagttggtcagtggaat
atgatgaacaagaaagtgataaatggaagcactgtaagatactgggcttgtatcaacttc
tcacgaagtgttcaggagagcactgctcattgtttttgtcaggagttggttcagatgtgc
caagtctctggcatggaatttaatcgagatcctgtaattcctatatattcagcaagacca
gatcaagttaagaaagcactgaaatatgtatatcatgctgctgaaaacaaacttgaagga
aaagaactggaattactcattgccattcttccagacaacaatggctctctgtatggtgat
cttaaacgaatttgtgaaacagatctgggtttgatttctcaatgctgcctcacaaaacat
gtcttcaagattggcagacaatacttggcaaatctctcccttaaaataaatgtcaagatg
gggggaagaaatactgtgctcttagatgctttaagttggagaattcctttggttagtgac
attccaacaataatatttggggctgatgtaactcatccagaatctggagaggactctagt
ccatctatagctgctgttgtggcctcacaagactggccagaagtgacaaagtacgctgga
ctggtatgtgctcagcctcataggcaagaattaattcaagatctgttcaaaacctggcag
gatcctcaacggggaacagttactggaggcatgatcagggagctcttacttgcatttaag
aaggccactggacaaaagccactgaggataatcttttacagagatggtgtcagtgaaggc
cagttctaccaggttctactgtatgaacttgatgccatacggaaggcctgtgcatcactg
gaatctacttaccaacctccagttacattcattgtggttcaaaagaggcatcacactagg
ctgtttgcaagcaatcacagtgacagaagcagcactgagaagagtgggaatatattacct
gggacggtggtggactctaagatctgtcatccaactgagtttgacttctatctgtgtagt
catgcgggaatccaggggacaagtcgacctgctcactatcatgttctgtgggatgaaaat
aacttcacagcagatgagatccagtctctgaccaacaacctctgttacacgtacgctcgg
tgcactcgatctgtttctgttgtgcctccagcatattatgctcatctagcagcctaccga
gctcgattctacattgaaccagaggcaaccgaaaatgctaaagggagatgcacacgcacg
agcaatggatcatctgtccggcccttaccagcattgaaagagagggtgaagaatgtgatg
ttttactgttaa
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