KEGG   Theobroma cacao (cacao): 18589014
Entry
18589014          CDS       T02994                                 
Name
(RefSeq) uncharacterized LOC18589014
  KO
K03873  elongin-B
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    18589014
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tcc04121]
    18589014
   03400 DNA repair and recombination proteins [BR:tcc03400]
    18589014
Ubiquitin system [BR:tcc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     18589014
   Cul5 complex
     18589014
DNA repair and recombination proteins [BR:tcc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     18589014
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Dsc3_N UBL_UBAC1 DUF3969 Rad60-SLD_2 Ubiquitin_5 Ubiquitin_2
Other DBs
NCBI-GeneID: 18589014
NCBI-ProteinID: XP_017983340
UniProt: A0AB32WY73 A0A061GWI4
LinkDB
Position
9:complement(9044838..9048477)
AA seq 103 aa
MAMYIRVKRSKTTYFIQCDPTETALDIKQKLHTLIDQPVNDQRLILVNTGEILEDSKTLA
DQKVENDAVVALTLRKDDNEFEDVNIVQPNDFYQSRDADSGNW
NT seq 312 nt   +upstreamnt  +downstreamnt
atggctatgtacattcgtgtcaagcgtagcaagacgacatactttatccagtgtgatcct
actgagactgctttagacataaagcaaaagttgcataccctcattgatcaacctgttaat
gatcagcgtttgatcctagtgaatacaggggaaatattagaggattcaaaaactttagca
gatcagaaggttgaaaatgatgctgttgtggcactgaccttgagaaaagatgacaatgag
tttgaggatgtcaacatagtacaaccaaacgatttctaccaatctcgtgatgcagatagt
ggaaattggtga

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