Theobroma cacao (cacao): 18589045
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Entry
18589045 CDS
T02994
Name
(RefSeq) autophagy-related protein 18b
KO
K17908
autophagy-related protein 18
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
18589045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcc04131
]
18589045
03029 Mitochondrial biogenesis [BR:
tcc03029
]
18589045
Membrane trafficking [BR:
tcc04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
18589045
Mitochondrial biogenesis [BR:
tcc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
18589045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_Vps41
WD40
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_RSE1_2nd
BCAS3_WD40
Beta-prop_IFT140_1st
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
18589045
NCBI-ProteinID:
XP_007013914
UniProt:
A0AB32UQM3
LinkDB
All DBs
Position
9:9308951..9318495
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AA seq
369 aa
AA seq
DB search
MARQSSSYPILCASFNQDNSGLAISTKDGFKIFDSNTGRLCYERAVGAFIIVEMLYSSSL
LAIVGAGEQPSLSPRRLCLFNTTTSAPLREMTFLTSILAVRLNRKRLVVVLQEKTYIYDS
NSLEILDTVDTVPNLKGLCAFSPSLDGCFLALPASTIKGSVLVYNVMELQSHCEIDAHRS
PLAAITLSSNGTYIATASEQGTIIRVHLVSEATQSYSFRRGRYPSTIFSLSFAPSLHLPD
ILAATSSSGSVHIFSLGFATNQRCKRSSSFLGSILPDSVNDALDPADHHVLHAAVSAGVR
SYAVVRKVDKIADASSSEFSSCRAVVSLITYNGYFQEYTFSINNKNESSWSLDREFNLLT
FVSDSAKSS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtcagtcctcctcgtacccaattctgtgcgcttccttcaatcaagacaacagt
ggtcttgcaataagcactaaggatggtttcaaaatattcgattcgaacaccggaagactc
tgctacgaacgagctgttggagctttcattattgttgagatgctgtatagttctagtctt
ctcgccattgttggagctggtgaacagccatcgttatctccacgccgtctttgtttgttc
aatactacaaccagtgctcctctccgagaaatgactttcctaacttcgattcttgctgtt
cgcttaaataggaaaagacttgttgtggttttgcaagaaaaaacgtacatatatgactca
aacagccttgaaatattggatactgttgacactgtgccaaatctaaagggactttgtgca
ttttcccctagtttggatggttgcttcttggctcttcctgccagtacaatcaaaggatct
gtattagtgtacaatgtcatggagctccagtcacattgtgagattgatgcccaccggtct
cctttggctgcgattactttatcttccaatgggacatacattgcaacagcatctgaacag
ggaacgataatcagagttcatctggtttcagaagcaactcagtcatatagtttccggagg
ggaagatacccatcgactatattttcattgtcatttgcaccatcattgcatcttcccgat
attcttgcagccacgagttcttccggttctgttcacattttctctctggggttcgctaca
aatcagaggtgcaaaagatcaagtagttttcttggatcaatattacctgattctgtgaat
gatgcactagatccagctgaccatcatgtgcttcacgctgctgtttctgcaggagtcaga
agctatgcggtggttcgcaaggtagacaagattgctgatgcatcctcatccgaattttca
tcttgtagggccgttgtatccttaataacatacaacgggtactttcaggaatataccttc
agtatcaacaacaagaacgagtcttcatggagcctggatcgcgaattcaaccttctgaca
ttcgtttcagatagtgcaaaaagctcatga
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integrated database retrieval system
