Theobroma cacao (cacao): 18589392
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Entry
18589392 CDS
T02994
Name
(RefSeq) TBC1 domain family member 5 homolog A
KO
K18469
TBC1 domain family member 5
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcc04131
]
18589392
Membrane trafficking [BR:
tcc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
18589392
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
18589392
NCBI-ProteinID:
XP_017983051
UniProt:
A0AB32WZG9
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All DBs
Position
9:15769596..15774217
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AA seq
829 aa
AA seq
DB search
MSKEMVKEEAPSSSGVVSEENRPFGSLRSVQWRINLGILPSSSSSSSSIDDLRRVTADSR
RRYAGLRRRLLVDPHVPKDGGSSSPDLVMDNPLSQNPDSTWGRFFRNAELEKMVDQDLSR
LYPEHGSYFQTPGCQGMLRRILLLWCLGHPECGYRQGMHELLAPLLYVLHVDVERLSEVR
KLYEDHFIDKFDGLSFEENDVTYNFDFKKFLDSMEDEIGSHSNSKKVKSLDELDPEIQTI
VLLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMSGAHGAVAMADFFSPSPAAESHSSLP
PIIEASAALYHLLSIVDSSLHSHLVELGVEPQYFALRWLRVLFGREFSLQDLLVVWDEIF
TADNSQLHRDSEDDESSSFKILNSHRGALISAVAVSMILYLRSSLLATENATSCLQRLLN
FPENINLKKIIVKAKSLQILALDSNVSSLSSTFGGAYNCSKSAVVRGHSLSSDSVSPKTP
LSLVPDSYWEEKWRVLHKEEELRQNSVGKQTPSGKKRWSEKVKLSLSRTESDPSPARAEN
CKKGHRSSIRRSLLEDLSQQLGLEEDAEKGGCLGASNSEDDHCIEVLVEGDNCTNKESIC
AAEERCESGSGTVVSDENSSIFSEPASPGSGTNDHENDTEKSSVASNLFIDENDDHQQSN
LEDSPLPVSLPPEDVPLNSLHENESSGKMVSAMKERRHLSGRFQWFWKFGRNNVGEETSD
KGGTNEAAKSPNHDCKRNTADSLTAGASRNSSSTSKGDAVDQNVMGTLKNIGQSMLEHIQ
VIESVFQQDRGQVGSLDNFSKNILVGKGQVTAMTALKELRKISNLLSEM
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagagatggtaaaggaagaagcgccgtcgtcgtcgggtgtcgtttcggaggag
aatcgtcctttcggtagtctgagaagcgtccaatggcgtatcaatctcgggattttacct
tcttcttcttcttcttcgtcttcgattgatgatcttcgcagggtaactgctgattctcgc
agaagatatgctgggttgagaaggcggctgctagtggatccacatgttcccaaggatgga
ggaagtagttcccctgatcttgtcatggacaatccactctcacaaaacccagacagcacc
tggggtcgattctttcgaaatgcagagctggaaaaaatggttgaccaggatttatcacga
ttatatccagaacatggaagctacttccagactcctggatgccagggaatgttaagacga
atactgttgctgtggtgccttggacacccagagtgtggttatagacaaggaatgcatgaa
ctcttggctcctctgctgtatgttcttcatgttgatgttgagcgtctttcagaagtgcga
aagctttatgaagaccatttcattgacaaatttgatggattgtcatttgaagagaatgat
gttacatacaattttgattttaagaagtttttagattccatggaagatgagattggatct
cacagtaattcaaagaaagttaagagtcttgatgagcttgatcctgagatacagaccatt
gtattgctaagtgatgcttatggagctgaaggtgaacttggtattgtcttgtctgagaaa
tttatggaacatgatgcctactgtatgttcgacgccttaatgagtggggcgcatggtgca
gtagctatggcagattttttttctccctctcctgctgcagagtctcacagtagcttgccc
cccatcattgaagcctcagctgcattatatcatttactttcaattgttgattcttcgcta
catagccatcttgttgagcttggtgttgaaccccagtattttgcacttcgctggttgagg
gttttatttggacgggagttttcacttcaagatctcttagttgtatgggatgagattttc
acagcagataacagccaacttcatagagactctgaagatgatgagagttccagttttaaa
atactcaattcacaccgtggagcattaatttctgctgtggcagtctctatgatactttat
ctgagatcttccttgcttgccactgaaaatgctacttcttgtcttcagagactcttgaat
tttccagagaatataaatttgaaaaaaattatagtgaaggcaaagtctttgcaaattctt
gcattggattctaatgtctcatccttgtcatctacatttggtggggcttataactgcagc
aagtctgcagtggtgagaggtcacagtctttcatctgattcagtttctccaaaaactcct
ctaagcctggttcctgacagctattgggaagaaaagtggagagtactgcataaggaagag
gaactaaggcaaaatagtgtaggtaaacaaactccaagtgggaagaagagatggtcagaa
aaagtaaagctgagcctatctagaactgaatctgacccatcacctgcaagagcagagaat
tgcaaaaagggccataggtcatccattaggcgtagtttgcttgaagatttgtcgcagcaa
cttggcttggaggaagatgctgaaaaaggaggctgtcttggagcttctaactcagaggat
gatcattgtatagaagttctggtggagggagacaattgtactaacaaagagtctatttgt
gcagctgaggagagatgtgagagtggaagtggaactgttgtcagtgacgaaaactcctct
attttttccgagccagcaagccctggcagtggcacaaatgaccatgaaaatgacacagaa
aaaagtagtgttgcgtcaaatttatttatagatgaaaatgatgatcaccagcaaagtaac
ctagaagattcacctctgccagtttcccttcctcctgaagatgtccctctaaattctctg
catgagaatgaatcttcagggaaaatggtctcagctatgaaggagcgaaggcatctttca
ggtagattccagtggttttggaagtttggacgaaacaacgtcggtgaggagacatctgat
aaaggaggtaccaatgaggctgcaaaatctccaaatcacgattgcaagcgcaatacagca
gactcattaactgctggtgcttctcgtaattcatcttccaccagcaaaggagatgctgtg
gaccagaatgtgatgggcacattaaagaatattggacagtctatgcttgaacacattcag
gttatcgagtctgttttccagcaagatcggggtcaggtgggatcattggacaacttctct
aaaaacattcttgttggcaaaggacaagttacagccatgacagctctcaaggagcttcgg
aagatcagcaaccttttatcagagatgtga
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