Theobroma cacao (cacao): 18589414 Help Entry 18589414          CDS       T02994                                  Name (RefSeq) pre-mRNA-processing factor 17   KO K12816   pre-mRNA-processing factor 17 Organism tcc  Theobroma cacao (cacao) Pathway tcc03040   Spliceosome Brite KEGG Orthology (KO) [BR:tcc00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     18589414  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:tcc03041]     18589414 Spliceosome [BR:tcc03041]  Complex C   Other components    Step II factors     18589414 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st EIF3I Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_SPT8 WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_DCAF4 WD40_MABP1-WDR62_1st WD_LRWD1 eIF2A Beta-prop_NWD2_C Beta-prop_SCAP PAN2_N Motif Other DBs NCBI-GeneID:  18589414 NCBI-ProteinID:  XP_017983836 UniProt:  A0AB32X1E5 LinkDB All DBs Position 9:complement(16299453..16301231) Genome browser AA seq 592 aa AA seqDB search MNQAFRKSSMDLLQTYADNSDSDDQNRQPSTSSPDSSPPRLIPSKSAAPKVDDTMLALTA AKTHQAHSKPIDPTQHVVAFNPTYDQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASI ESFVFDEQYNTFHKYGYAADPSGNNYIGDLDALQKNDAISVYNIPQHEQKKRKIEKRKEM EVEEDEVVGGEGEVDPTEIENPASDVWLMKNKTSPWAGKKEGVQTELTEEQKKYAEEYAK KKEEKGHPGEKGEHVVDKTTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSG HTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTK FLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDEDKQNILLAGMSDKKIVQWDIN TGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPS ISLHPNTNWLAAQSLDNQILIYSTRARFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSG DGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW NT seq 1779 nt NT seq  +upstreamnt  +downstreamnt atgaatcaggctttcagaaaatcatctatggatcttctacaaacatatgcagataatagt gatagtgatgaccaaaatcgccaaccatctacttcatctccagactcttcacctccacga ctcatcccctccaaatctgctgcacctaaggttgatgacacaatgctggccctaactgca gcaaaaacacaccaagcccattcaaagcccattgacccaactcagcatgttgttgccttc aacccaacttatgaccaactctgggctcctatttatggcccagctcatccatatgccaag gatggcattgcccagggcatgcgcaaccacaagctgggatttgttgaggatgcctccatt gagtccttcgtttttgatgagcaatacaacaccttccacaaatatggttatgctgctgat ccttcaggaaacaactatattggtgatttggatgctttgcagaagaatgatgccatttca gtctataacatccctcaacatgagcaaaagaagcgaaaaattgagaaaaggaaggaaatg gaagtggaggaggatgaggttgtgggtggtgagggtgaggttgatccaacagagattgag aatccagctagtgatgtgtggttgatgaagaataaaacgagtccttgggcaggtaaaaaa gagggggtgcaaacagagttgactgaggagcagaagaagtatgcagaggagtatgcaaag aagaaagaagagaaaggccatccaggtgagaaaggggagcatgtggtggataagactact tttcatggaaaagaggagagagactaccaaggcaggtcttggattgcacctcctaaagat gcaaaagcaacaaatgatcattgttatataccaaagagattagtacacacttggagtggg cacacaaagggagtttcagctattcgcttcttccccaaatatgggcatttgattctctct gcagggatggatactaaagtgaagatctgggatgtgtttaattcaggcaagtgtatgagg acatacatgggtcattcaaaggcagtaagagatatttcattttgtaatgatggcactaaa tttttgactgctggatatgataagaacatcaagtattgggatactgaaactgggcaggtt atttcaactttctcaactgggaagattccttatgtggttaagcttaacccggatgaagat aagcagaatattctgttagcgggtatgagtgataagaagattgtgcagtgggatattaac actgggcaaattacccaagagtatgatcagcatttaggggcagtgaatacgattacattt gtcgataacaataggagatttgttacttcaagtgatgacaagtcacttcgagtatgggaa tttggaattcctgttgtcataaagtatattagcgaacctcacatgcactctatgccatca atttcacttcaccccaacacaaattggcttgcagctcagagtttggataatcaaattctt atttacagcactagggcaagatttcagcttaacaagaaaaaaaggtttgctgggcacatt gtggctggctatgcttgccaagtaaatttttcaccagatggacggtttgttatgtctgga gatggagagggtaagtgctggttttgggactggaaaagctgcaaggtatttagaacttta aagtgtcatgaaggtgtttgcattgggtgcgagtggcatccattggagcaaagtaaagtt gcaacttgtggctgggatggcttgattaagtactggtga

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