Theobroma cacao (cacao): 18589419
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Entry
18589419 CDS
T02994
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 4
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tcc01009
]
18589419
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcc03021
]
18589419
Enzymes [BR:
tcc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
18589419
Protein phosphatases and associated proteins [BR:
tcc01009
]
HAD phosphatases
Fcp/Scp phosphatases
18589419
Transcription machinery [BR:
tcc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
18589419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
BRCT
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
18589419
NCBI-ProteinID:
XP_007014445
UniProt:
A0AB32UQZ7
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Position
9:complement(16510826..16516343)
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AA seq
470 aa
AA seq
DB search
MSLVTDSPVHSSSSDDFAALLDAELEVGSSGSSPDEEDVEADGDNNNDNNDDDDDDDDDL
DSQRNKRCKTEKLEDLEESQGSTSQGLIEDKIVIHAELSLKKDICTHPGSFGQMCILCGQ
RLDDESGVTFGYIHKGLRLGNDEIVRLRSTDMKNLLRHKKLYLVLDLDHTLLNSTQLMHL
TPDEEYLKGQSDSLQDVSRGSLFMLDFMHMMTKLRPFVRTFLKEASEMFEMYIYTMGDRP
YALEMAKLLDPRREYFSDRVISRDDGTQKHQKGLDVVLGQESAVVILDDTENAWMKHKDN
LILMERYHYFASSCHQFGYKCKSLSQLKSDESEPDGALASVLKALRQIHHMFFDELDCNL
ASRDVRQVLKTVREEVLKGCKIVFSHVFPTNFPAESHPLWKMAEQLGATCSTETDLSVTH
VVSTDAGTEKSRWAVKEKKFLVHPRWIEATNYLWQKQPEENFPVSQGKNQ
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcgtaactgattccccagtacactcgtctagcagcgatgactttgccgcattg
cttgatgctgagctggaagtcggttcttctggttcatcaccagacgaagaagatgtagaa
gctgatggtgataataataatgataataatgatgatgatgatgatgatgatgatgacctt
gatagtcaaaggaacaaaaggtgcaagactgagaagttggaagaccttgaagaatctcag
ggatcaacctctcagggtttgatagaggacaagatagttatacatgcagaactgtccttg
aagaaggatatatgtacacatccaggttctttcggacaaatgtgcatcctttgtgggcaa
aggttggatgatgaatctggtgtaacatttgggtatatacataagggtttaaggcttggt
aacgatgaaattgttcgattacgcagcacagacatgaaaaatttgttacgtcataagaag
ctttatttagtccttgatttagatcacacactgcttaattctactcagctcatgcaccta
acacctgatgaagaatatttgaagggtcaatctgattcccttcaagatgtttcaagaggc
agcctcttcatgttggactttatgcatatgatgaccaaattgaggccctttgtccgtaca
tttctcaaagaagcaagtgaaatgtttgagatgtatatttacacaatgggtgatagaccc
tatgcattagaaatggctaaactgcttgaccccagaagagagtacttcagtgatagagtg
atttcaagagatgatggcacccagaaacaccaaaagggtcttgatgtagtactagggcaa
gagagtgctgttgtgatccttgatgatacagaaaatgcatggatgaagcacaaagacaat
ttgatactgatggaaagatatcattactttgcttcaagttgtcatcaatttggctacaaa
tgcaagtcactttctcagttgaagagtgacgaaagtgagcctgatggagcacttgcttcg
gttcttaaagcacttaggcaaatccaccacatgttctttgatgaacttgattgcaatctt
gctagcagagacgtcaggcaggtgttgaaaacagttcgggaggaagtgctcaaagggtgt
aaaattgttttcagccatgttttcccgacaaatttcccagcagagagtcatcctctgtgg
aagatggcagagcagttaggagctacttgctcaacagaaactgacctttcagttacacat
gttgtttcaacagatgctgggacagaaaagtctcgctgggcagtgaaggagaagaagttt
ttggtccatccacggtggatagaagctacaaattatttgtggcagaagcagcctgaagag
aactttcccgttagccaaggaaagaatcaatga
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