Theobroma cacao (cacao): 18589886
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Entry
18589886 CDS
T02994
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
18589886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcc03021
]
18589886
Transcription machinery [BR:
tcc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
18589886
Prokaryotic type
Archaeal type
TFB
18589886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
WHD_GDS1
RB_B
DUF7573
Motif
Other DBs
NCBI-GeneID:
18589886
NCBI-ProteinID:
XP_007015120
UniProt:
A0AB32URJ7
LinkDB
All DBs
Position
9:29992588..29996743
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AA seq
312 aa
AA seq
DB search
MADSFCPDCKRPTEVVFDHSAGDTVCSECGLVLEAHSIDETSEWRTFANESGDNDPVRVG
GPSNPLLADGGLSTVISKPNGSSGDFLTSSLGRWQNRGANPDRSLIQAFKTIATMSDRLG
LVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMSNQTVKAAQEAVQKSEEL
DIRRSPISIAAAVIYIITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPHASKLVPSWY
AKKEDLKNLCSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggctgactctttctgcccagattgcaagcgtccaaccgaagttgtcttcgaccactca
gccggagacactgtctgctccgagtgcggtcttgttcttgaggctcattccatagacgag
acctctgagtggcgaacctttgccaatgagtctggggacaatgacccagttcgtgtcggc
ggtccttctaatcctcttttggccgatggtggcctctctaccgtcatttccaaacctaat
ggctcctctggtgatttcttgacatcctctttgggacgctggcagaaccgcggggcaaac
ccggatcgttcccttatccaggcctttaagaccattgccaccatgtctgacaggttgggc
cttgttgcaaccattaaggatcgagccaacgaaatatataagaaagttgaagatcagaaa
cctcttagaggccgaaaccaggatgcaattttggctgcttgcctctatattgcctgtagg
caagaagacaaaccccgcaccgtaaaagaaatatgctctgttgccaatggagccacaaag
aaagaaattggtcgtgcaaaagagtatatcgtgaagcaattggaggtggagatgggtcaa
tccatggaaatgggaacaatacatgctggggactttctgagacgtttctgctcccatctt
ggtatgagtaatcaaacagttaaggctgctcaagaagctgtacaaaaatctgaagagctg
gatataaggagaagcccaatatcaattgcagctgctgtcatttacataataacccaactg
tcagacgataagaagcttctcaaagatatatctctagcaacaggagtggctgaagggacc
attagaaattcctacaaggacctccatccccatgcttcgaagcttgtaccaagctggtat
gccaaaaaggaagaccttaagaatctctgcagtccttaa
DBGET
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