Theobroma cacao (cacao): 18589939
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Entry
18589939 CDS
T02994
Name
(RefSeq) protein CHROMATIN REMODELING 5
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcc03021
]
18589939
03036 Chromosome and associated proteins [BR:
tcc03036
]
18589939
Transcription machinery [BR:
tcc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
18589939
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
18589939
SLIK complex
18589939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
Helicase_C
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
Chromo_MIT1
SWI2_SNF2
ATP-sulfurylase
Motif
Other DBs
NCBI-GeneID:
18589939
NCBI-ProteinID:
XP_017982665
UniProt:
A0AB32WY10
LinkDB
All DBs
Position
9:30568859..30587946
Genome browser
AA seq
1771 aa
AA seq
DB search
MAFFRNYSSDTVSHSVLEEKSQGQSIGRIHSTVGNEDVDGTYEREFDINMDAQYQSDGEP
DDAVRLHNEVPADNVAGVSNSNFQPAGRRIAPGKWGSTFWKDCQPMDRQGGSDSGQDSKS
DHKNLEVLEYNSSDDRDDRLESDDDEAQKEVGKAQRGHSDVPADEMLSDEYYEQDGEEQS
DTMHYRGFSNSVGLNTRPQSKPVCVSTTVSRGSRALNTRNYDDEDDDVNNDDADADYEEE
EEEDDDDPDDADFEPDYGVASGHAGNKDKDWDGEDSEEEDNSDGDVDVSDEDDSYYKKKP
KGRQQVKVGRNVKPNKERKSSNRQRRGRSSFEEDEYSAEDSDSESDGNFKSMARRGGNLR
KHNARSNMLTSMGRNNEVRTSSRSVRKVSYVESEESEEIDEGKKKKTLKDEAEEEDGDSI
EKVLWHQPKGMAEDAIRNNRSTEPVLLSHLFDSEPDWNEMEFLIKWKGQSHLHCQWKSFF
ELQNLSGFKKVLNYSKKVMEDVRYRKALSREEIEVNDVSKEMDLDLIKQNSQVERVIVDR
ISKDASGSVMAEYLVKWQGLSYAEATWEKDIDIAFAQDAIDEYKAREAAMAVQGKMVDHQ
RKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVS
MLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPDMNVIVYVGTRASREVCQQYEFYN
DKKIGRPIKFNTLLTTYEVVLKDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTK
NKLLITGTPLQNSVEELWALLHFLDPDKFKSKDDFVQNYKNLSSFNEIELANLHMELRPH
ILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVV
ELKKCCNHPFLFESADHGYGGDISMNDISKLERIILSSGKLVILDKLLVRLHETKHRVLI
FSQMVRMLDILAEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGL
GINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKK
MVLDHLVIQKLNAEGRLERKETKKGSYFDKNELSAILRFGAEELFKEERSDEESKKRLLS
MDIDEILERAEKVEEKQGEEQENELLSAFKVANFCNAEDDGTFWSRWIKPDAIAQAEEAL
APRAARNTKSYAETSQPERSNKRKKKGSDPQEFQERVQKRRKAEYSAPLAPMIEGATAQV
RGWSYGNLPKRDALRFSRAVMKFGNESQVTLIAEEVGGAVAAAPADAQIELFKALVEGCR
EAVEVGNAEPKYLQGPLLDFFGVPVKANDLINRVQELQLLAKRINRYEDPIKQFRVLMYL
KPSNWSKGCGWNQIDDARLLLGIHYHGFGNWEKIRLDERLGLTKKIAPVELQHHETFLPR
APNLKERANALLEMEVVAVGGKNTGIKAGRKAAKKEKENSLNVSTSRGRDKKGKPGSPKV
SFKMGRDRPQRPQKVEPLVKEEGEMSDNEEVYEQFKEVKWMEWCEDVMIDEIKTLRRLQR
LQTTSADLPKDKVLSKIRNYLQLLGRRIDQIVLDHEDELYRQDRMTMRLWNYVSTFSNLS
GERLHQIYSKLKQEQEEDGGVGPSHVDGSVTGHVDRDGDSNYFPPFSRSVEKQRGYKNVM
AYQTSQPIHKGIDTAKFEAWKRRRRAEADIHPQLQPPTQRPMSNGSRVIDPNSLGILGAG
PPDKRLVNNERPYRMRQTGFPQRQGFPSGIK
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atggcattttttaggaactattcgagtgacacagtctcacacagtgtcttggaggagaaa
agccagggacaaagcatcggtaggattcacagcacagtaggaaatgaggacgtagatgga
acttatgaaagagaatttgatattaacatggatgcacagtatcaaagtgatggggagccg
gatgatgctgttaggctgcataatgaggtgcctgctgataatgttgctggtgtttcaaat
tcaaattttcagccagcaggaagaagaatagctcctgggaaatggggttcaactttttgg
aaggactgccagcccatggatcgccaggggggatctgattctgggcaggattcaaaatcc
gaccataagaatttggaagttttggaatataattcgtcagatgacagggatgatagatta
gaatcagacgatgatgaggcccagaaagaagtgggcaaggctcaaaggggtcattctgat
gtccctgcagatgagatgttatctgatgaatactacgagcaggatggggaagagcaaagt
gatacaatgcattacagaggctttagcaattctgttgggttaaatactaggccacagtca
aagcctgtttgtgtcagtacaactgtgtccaggggttcaagagctttaaatacccgtaac
tatgacgatgaggatgatgatgtcaacaatgatgatgctgatgcagactatgaagaggag
gaagaggaagatgacgatgaccctgatgatgcagattttgagcctgactatggtgttgct
agtggtcatgcggggaataaggataaagattgggatggtgaagattctgaggaagaagac
aatagcgatggcgatgtagacgtctcagatgaagatgattcttattacaaaaaaaagcct
aagggtaggcaacaggttaaagttggacgtaatgtgaaacccaataaagaacgtaaatcc
tcaaatcgacaaagaagagggagatcttcatttgaagaggatgaatactcagctgaggat
tctgacagtgaaagtgatggcaatttcaaaagcatggcaaggagaggtggaaatctccgc
aaacataatgcccgttctaatatgttgacaagcatgggaagaaacaatgaggttcgtact
tctagtaggtccgttcggaaagtatcatatgttgagagtgaagaaagtgaagaaattgac
gaaggcaagaagaaaaagacacttaaggatgaggctgaagaggaagatggtgactcaatt
gaaaaggtgttatggcatcaaccgaagggcatggctgaagatgcaattagaaacaataga
tcaacagagcctgttctgctaagccacttgtttgactctgaacctgattggaatgagatg
gaattcctgataaaatggaagggccagtcacatcttcattgtcagtggaaatcgtttttt
gagttacaaaatcttagtggttttaagaaggttctaaattactcaaaaaaggtgatggag
gatgtgagatacaggaaggccctttcacgtgaggagattgaggtcaacgatgtaagtaag
gaaatggacttggatctaatcaagcaaaatagtcaggtggagagagtaattgttgatcga
atcagtaaagatgcctctgggagtgtgatggcagagtacttagtcaagtggcagggattg
tcttatgcagaagcaacttgggaaaaggatatagatattgcatttgctcaagatgctatt
gatgagtataaggctcgtgaagctgcaatggctgtgcagggtaaaatggtagatcaccag
cgtaagaagggcaaagcaagtttgcggaaacttgatgaacagccagagtggttaagggga
ggaaaacttcgtgattatcaactggagggtttgaattttctcgttaacagttggagaaat
gatactaatgtcatcttagctgatgaaatgggtcttggtaaaactgttcagtcagtatct
atgcttggtttcttacagaatgctcaacagatacctggtccatttcttgtggttgtacca
ttatccaccttatcaaactgggccaaagaattcaggaagtggcttccagatatgaatgtt
attgtatatgttggtactcgtgcaagccgagaggtttgtcagcaatatgaattttacaat
gacaagaaaattggcagacctataaaatttaataccctgctgactacgtatgaagtagtt
ctgaaggataaggcagtactgtctaagataaggtggaactatttgatggttgatgaagct
cataggttgaagaatagcgaggcgcagttgtacactacactttcggaatttagcactaag
aacaagttgctaattactggaactccattacaaaacagcgttgaggagctttgggctctg
cttcatttccttgatcctgacaagttcaaaagtaaagatgattttgttcaaaattacaag
aaccttagctcgtttaatgaaattgagcttgctaatcttcacatggaattgaggcctcac
attcttcgaagggttatcaaggatgtggaaaagtctttgcctccgaaaattgagcgtatc
cttagggttgagatgtctccacttcagaaacagtactataagtggattttggaacgcaac
ttccatgacttgaacaagggtgttcgtggcaatcaggtctcacttttaaatatagtagta
gagttgaagaaatgctgcaatcatccttttctgtttgaaagcgcagatcatggttatggt
ggggacattagcatgaatgatataagtaaactggagagaattatattaagcagtgggaaa
ctagttatacttgacaaattgcttgtcaggttgcatgaaacgaagcatcgagttctaatc
ttctcccagatggttagaatgttggatatactagctgagtatatgtcgctcagaggattc
caattccagaggcttgatgggagtacaaaagcagagttgcgacagcaggctatggatcat
ttcaatgcacctggaagtgatgatttctgcttccttctttctactcgggccggtggcctt
ggtatcaaccttgcaactgctgacactgttataatttttgattctgactggaatccccag
aatgacttacaggcaatgagtagagctcacagaattgggcaacaagaagttgtcaacatt
tacagatttgtgacaagcaaaagtgttgaggaagacatcctggagcgagctaagaagaag
atggtgcttgaccatttggtgatccaaaaattaaatgcagagggtagactggagaggaaa
gaaacaaagaaggggagttattttgacaagaatgagttatcagcaattttgagatttggg
gctgaagaattgttcaaggaggagagaagtgatgaagaaagcaaaaaaaggctgttaagt
atggatatagatgaaattcttgaaagggcagagaaggttgaggagaagcagggtgaagag
caagagaatgaattgttgagtgcttttaaggttgcgaatttctgtaatgctgaagatgat
gggactttctggagtcgttggataaaaccagatgccatagcccaagctgaagaagcttta
gctcctcgtgctgcgagaaacaccaagagttatgcagagacaagtcaacctgagagaagt
aacaaaagaaagaagaaaggctctgatcctcaggagtttcaggagagagtacaaaagcgt
cgtaaagcagaatactctgcccccttggcaccaatgattgagggagcaactgctcaagtg
agaggatggtcttatgggaatctgcctaagagagatgctttgcgtttttctcgagcggtc
atgaaatttgggaatgagagccaagtcactttgatagcagaggaagttggtggtgctgtt
gcagcagctccagctgatgcacagattgagctttttaaagctttagttgaaggatgcaga
gaagcagttgaagtaggaaatgcagaacctaagtacctgcagggaccattgttggacttc
tttggtgtgcctgttaaggcgaatgatctgatcaatcgtgtccaagaacttcagctctta
gcaaagcgaataaatcgatatgaggatcccataaaacagtttcgtgtgttaatgtacctt
aaaccgtctaattggtctaaagggtgtgggtggaatcagattgatgatgcaagattgctt
ctgggaatacactaccatggatttggaaattgggaaaagataaggttagatgaaaggctt
ggcctcacaaagaagattgctcccgtggaacttcaacatcatgaaacctttctgccacgt
gcccctaatttgaaggagcgtgctaatgcactcttggaaatggaagttgtggcagttggt
ggtaagaatactggtatcaaagctggtcgtaaggctgcaaagaaggaaaaggagaattct
ctaaatgtatcaacatctcgtggcagagacaagaaaggaaaacctggttctcctaaggtc
agttttaaaatgggtagggacagacctcaaagacctcagaaagttgaacctttagttaaa
gaggagggtgaaatgtcggacaacgaggaagtatatgagcagttcaaggaagtgaagtgg
atggagtggtgtgaagatgttatgattgatgaaataaaaacccttcgtcgtctccaaaga
ttgcagactaccagtgcagatcttcctaaggacaaggtgctttcaaaaattcggaattat
ttgcagcttcttggcaggcggatagatcaaattgtcttagatcatgaggatgagctctat
agacaagataggatgaccatgcgtttatggaactatgtctctacattttcaaatctttct
ggtgagaggctgcatcagatttattccaagcttaagcaggagcaggaagaggacggaggg
gttggaccatcccatgtcgacggctctgtgactggtcatgttgatagggatggtgattct
aattacttccctcctttctcacgttctgttgagaagcaaagagggtacaagaatgtgatg
gcctatcaaacatcacagccaattcacaaaggcattgatacggcaaagtttgaagcttgg
aagcgacgacggagagcagaagctgatattcatccccaacttcagcccccgactcaaaga
cctatgagcaatggtagccgtgtaatagatccaaactccttggggattcttggggcaggg
ccgccagataaacgacttgttaataatgagagaccatatcggatgcgtcaaactggattt
ccgcaaaggcaaggttttccctcaggcatcaagtaa
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integrated database retrieval system
