Theobroma cacao (cacao): 18590133
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Entry
18590133 CDS
T02994
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc04120
Ubiquitin mediated proteolysis
tcc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
18590133
04120 Ubiquitin mediated proteolysis
18590133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcc04121
]
18590133
Enzymes [BR:
tcc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
18590133
Ubiquitin system [BR:
tcc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
18590133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-RING_11
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
18590133
NCBI-ProteinID:
XP_007015539
UniProt:
A0AB32URQ9
A0A061GUW0
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All DBs
Position
9:complement(32378325..32384819)
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AA seq
543 aa
AA seq
DB search
MMRLRTYAGLSLVATLAVIYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCTLWQL
TKRVFLGSLREAEIERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLA
QKRVEYIETTPSVSMLSHVRIVSFMGFLLLLDCLFLYSSIKFLIQTRQASVSLFFSFEYM
ILATTTVSTFVKYVFYVSDMLMEGQWEKKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYG
VPLHLIRELYETFRNFKIRVADYMRYRKITSNMNDRFPDATPEELNASDATCIICREEMT
TAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTSSAGGQHGPRSDAHQQGSST
SSATQGPGGDMATDNLTQHQARLQAAAAAASIYEKSYIYPSANTLVWSPGYAVLPQAYGP
SADSTKVESSGERTFIGQQQFAIPGGHANLSFPQFPHCVFVPFELPGANGNSGEGSGSYQ
NIPDSQLEAQKIIQQKIEHQLQLLQKPKTEESMDIGLTGSSDRKGKATASSSVSETHNGE
AEE
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggctgcgaacctatgctggtctcagtttggttgcgacgctagctgtaatttat
catgcattcaacagtagaggccagttttatcctgctatggtttatttatcaacctctaag
atcagcttggtgttgcttctcaatatgggcctggtcataatgtgtaccttatggcagtta
acgaaacgagtatttcttgggtctcttcgtgaagctgagatcgagaggttgaatgaacag
tcatggagagaggtcatggagatcctctttgcaatcaccatttttcggcaggacttctct
gttacgtttcttgcaatggttacggctctgttgttaatcaaggctttgcattggttggca
cagaagagagtcgagtacattgagacaaccccttctgtttccatgttgtctcatgttcgg
atagtttcttttatgggtttccttcttcttctagattgtctgttcttgtacagttctata
aagtttttgatccaaacacgacaagcgtcagtctccctcttcttttcattcgaatacatg
atactggcaacaacgacagtgtcaacctttgtaaaatatgttttctatgtgagtgacatg
cttatggaaggacaatgggaaaaaaaggccgtctataccttctacttggagctcattcgg
gacttgcttcacttgtccatgtatctgtgcttctttcttgtgatcttcatgaactatggt
gtacctctgcacttaatacgggagctctatgagacctttaggaatttcaaaattcgtgtt
gctgattacatgcgttataggaagatcacttcaaacatgaatgatagattcccagatgca
accccagaagagctcaatgcaagtgatgcaacttgtattatatgtcgagaagagatgacc
acagcaaagaagttagtttgtggacatctttttcatgtgcactgccttcgatcatggcta
gaaagacagcatacctgccctacatgcagagcactggttgtaccacctgaaaacggaaca
agctcagctggagggcaacatggacctcggtcagatgctcatcaacaagggtcaagcaca
agttcagctacccaaggtcctggtggtgacatggccactgataatttgacccagcatcag
gccaggcttcaggctgctgctgcagcagcatcaatatacgagaaatcctacatctatcct
tctgcaaacacactagtttggtctcctggatatgctgtacttcctcaggcttatgggcct
tcggctgactccaccaaggtcgaatctagtggggaaagaacattcattggacaacagcag
tttgccattcctggtggacatgcaaacttgtcctttccgcaattcccacattgtgttttt
gtccctttcgagttacctggtgccaatggaaattcaggagagggatcgggtagttatcag
aatattccagattctcagttggaagctcagaagattattcaacagaagattgagcatcag
ctccaacttctgcagaagccaaaaactgaggaaagcatggacattggtctcacaggctca
tcagatagaaaagggaaggccacagcatcttcttctgtttcggagacccataatggagag
gcagaagagtga
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