Theobroma cacao (cacao): 18590156
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Entry
18590156 CDS
T02994
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcc03036
]
18590156
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tcc00535
]
18590156
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
18590156
Meiosis-specific proteins
Cohesin complex and associated proteins
18590156
Proteoglycans [BR:
tcc00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
18590156
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
ATG14
Motif
Other DBs
NCBI-GeneID:
18590156
NCBI-ProteinID:
XP_007015583
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Position
9:complement(32564176..32584299)
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AA seq
1203 aa
AA seq
DB search
MFIKQIIIEGFKSYREQIATEPFSPKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRSED
RHALLHEGAGHQVLSAFVEIVFDNFDNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRKQIIQVVQYLDERLKELDEEKEELRKYQQLDKQRRSLVYTIYDKELQDARRKLE
ELEEARTKVSETSAKMYNAVLDSHERFKELDKMSKDVTKELQSLNKDKEALEIQQAEALK
KQTALDLDVIDLEERMSGNMQAKDDAVKQLQMLQKEIQDSTEELNRIKPLYDSQVKKEEN
ITKGIMEREKQLSILYQKQGRATQFSSKAARDKWLQKEIDDLQRVLSSNLMQEQKLQDEI
GRLNADLKDLDVSIERRKTEIKELESSISQSRFNTQKTERDKLQDERKSLWEKESKLSAE
IDKLKAEVEKAEKSLDHATPGDVRRGLNSIRRICREYNIGGVFGPIIELLNCDEKFFTAV
EVTAGNSLFHVVVEKDEISTQIIRHLNSLKGGRVTFIPLNRVKAPHVTYPQSSDVIPLLK
KLNFSPKFTPAFAQVFGRTVICRDIDVATRVARTDGLDCITLEGDQVSKKGGMTGGFYDY
RRSKLKFMNVIMQNTMSINKKEEELKGVGSELQKLEQKITAFVTEQQQLDAKRVLDKSLL
EQHKQDIANANKQKQYICKALENKEKSLADVQTQIDQLRASMAMKHAEMGTELIDHLTPE
EKDLLSRLNPEITDLKEQLISCRSDRIETETRKAELETNLTTNLKRRKQELEAIISVAEA
DTLLDEAELKRHELMDAKLLVQDATQELKRVSDRIDERTKQLRAIKDEKNNLKGLEDAYE
GTLQDEAKELEQLLSKRSNLLAKQEEFSKKIRELGPLSSDAFETYKRKQVKELQKMLHRC
NEQLQQFSHVNKKALDQYVNFTEQREELQKRQAELDSGDEKIKELIAVLDQRKDESIERT
FKGVARHFREVFSELVQGGHGHLVMMKKKDGDRADDDDHDDDGPREVDLEGRVEKYIGVK
VKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAVG
NMIRRLADMANTQFITTTFRPELVKVADQIYGVTHKNRVSRVNVVSKEDALDFIEHDQSH
NTD
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgtttataaaacagattattatagaagggttcaaaagctacagggagcagattgctact
gagcctttcagtccaaaagttaattgtgttgttggtgctaatgggtctggcaaaacaaac
ttttttcatgcaattcgttttgttttgagtgacctcttccaaaatctgcgaagtgaagat
aggcatgcattgctacatgaaggtgcaggacaccaggttttatctgcatttgtggagatt
gtttttgataattttgacaatcgtatcccggttgacaaggaggaggtacgcctacgtcga
acaattggcttgaagaaggatgagtacttcttggatggaaagcatatcacgaaaacagaa
gttatgaatttactggaaagtgctgggttttctcgttctaatccttattatgttgtgcaa
caaggcaagatagcatccttgaccttgatgaaagattctgagaggctggacttattgaaa
gaaattggtggtactcgagtttatgaagagagacgtcgtgaaagcttgaaaatcatgcag
gaaactggcaataaaaggaagcaaataatacaagttgttcagtacttagatgagagatta
aaagagctggatgaagagaaagaagagcttagaaaatatcagcagcttgacaagcagaga
aggtcactagtatacaccatttatgataaagaacttcaagatgctcggcgtaaattggaa
gagttagaagaagctcgaaccaaggtttctgaaacatcagctaaaatgtataatgctgtg
ctggattcccatgaaaggttcaaggaactcgacaagatgtctaaagatgtgacaaaggag
cttcaaagtttaaacaaagataaagaagccttagaaattcaacaagcggaagctctaaag
aagcagactgcactcgaccttgatgtaattgatctagaagagaggatgtcggggaacatg
caagccaaagatgatgcagtgaaacagctacagatgttgcagaaggaaatacaggactca
acagaggagcttaacaggattaaacccctgtatgacagccaagtcaaaaaggaggagaat
ataacaaaagggatcatggagcgtgaaaagcagcttagcattctttatcagaaacaaggt
cgtgctactcagttttccagtaaagctgctcgtgataaatggcttcaaaaggaaattgat
gatttgcaacgagtgctttcgtcaaacttgatgcaggagcaaaagcttcaggatgaaatt
ggtcggcttaatgctgacttgaaggacttggatgtttctattgaaagacgcaaaactgaa
atcaaagagttagaatcttcaatctctcagtcacggttcaacactcagaaaacagaaaga
gacaagctgcaggatgaaaggaagtccttatgggaaaaagaaagtaaactttctgctgaa
atagataagctgaaagcagaagttgagaaagcagagaagagcctcgatcatgcaactcct
ggagatgtaaggagagggctgaattctatcaggaggatctgcagagagtataatattggt
ggagtgtttggtccaattattgagctactcaattgtgatgagaagttttttactgcagtt
gaagtaactgctggaaacagtttatttcatgtggttgttgaaaaggatgagatatcaacc
cagataattcgacatcttaattctctgaaaggtggacgtgttacttttataccacttaac
cgcgtaaaggctccacatgttacatatccacaaagttctgacgtgatacctctgttaaag
aaattgaacttttctcccaaattcactcccgcatttgcacaggtatttggtagaacagtg
atctgccgagatattgatgtggctacaagagttgctcggactgatggcctggattgcata
actttggaaggtgatcaagttagcaagaagggtggtatgactgggggattttatgattat
aggcgctccaaattaaagttcatgaatgtaattatgcaaaacacgatgtctataaataag
aaggaagaagagctgaaaggagttggctcagaacttcaaaagttagaacagaaaattaca
gcctttgttactgaacagcagcaacttgatgctaagcgggttcttgacaaatcactgttg
gaacagcataagcaggacattgctaatgctaataagcaaaagcaatatatatgtaaagct
cttgaaaataaggaaaagtcacttgcagatgtccagacgcaaattgatcagcttagagct
agtatggccatgaaacatgctgaaatgggcacagagcttattgatcacttaacgccagaa
gagaaggaccttctgtctagattgaaccctgaaataacagatcttaaggagcagcttatc
agttgcaggagtgatcgcattgagactgaaacgagaaaagcagaacttgagactaatctc
acaaccaaccttaagaggcggaaacaagagttggaagcaataatatctgtggcagaggct
gacacgttgcttgatgaagctgaattaaagaggcatgagctgatggatgctaaattattg
gttcaagatgcaacacaggagcttaaaagagtttctgatagaattgatgaacgaacaaag
caacttagggcaatcaaggatgaaaagaacaatctaaagggtttggaagatgcctatgag
gggacacttcaggatgaagcgaaagagttggaacaactattaagtaaaaggagtaatctt
cttgctaagcaagaggagttctcaaagaaaataagggagctgggtcctttgtcgtcagat
gcttttgaaacgtataagcgaaagcaggtgaaagagttgcagaaaatgcttcataggtgc
aatgagcagctgcaacagttcagccatgtgaacaaaaaagcacttgaccagtatgtaaat
ttcacagagcaaagagaagaactgcagaaaaggcaggctgagttggactcaggcgatgag
aaaattaaagaacttatagcagttttagatcagcggaaggatgaatcaatagaacgcact
ttcaaaggtgttgcccgacattttcgagaagtattctctgaacttgtgcaaggtggtcat
ggtcatttggtgatgatgaagaaaaaggatggtgatcgtgctgatgatgatgatcatgat
gatgatggacctcgtgaggtggatttggagggaagggttgagaaatacattggcgtaaaa
gtgaaggtttcttttactgggcaaggtgagactcaatcaatgaagcagctgtctggagga
cagaaaactgttgtagccctcacgttaatttttgcgattcaacgatgtgatcctgctccc
ttttatctttttgatgagatagatgcagcgctggatcctcaataccgaactgctgttgga
aatatgattcgtcgtctggcagacatggcaaatacacaattcataaccaccacatttcgg
ccagagcttgtcaaagttgctgatcagatatatggggtgacacataaaaacagggtcagc
cgtgtaaatgttgtctcgaaggaagatgcgctagattttatcgagcatgatcagtctcat
aatactgattaa
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