KEGG   Theobroma cacao (cacao): 18590343
Entry
18590343          CDS       T02994                                 
Name
(RefSeq) protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc03250  Viral life cycle - HIV-1
tcc03272  Virion - Hepatitis viruses
tcc04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    18590343
   03272 Virion - Hepatitis viruses
    18590343
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    18590343
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tcc04131]
    18590343
   03400 DNA repair and recombination proteins [BR:tcc03400]
    18590343
Membrane trafficking [BR:tcc04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    18590343
DNA repair and recombination proteins [BR:tcc03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    18590343
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 AAA_16 AAA_5 RuvB_N AAA_14 AAA_22 TIP49 DUF815 NPHP3_N AAA_2 RNA_helicase AAA_17 AAA_33 AAA_25 IstB_IS21 NACHT AAA_24 AAA_28 Parvo_NS1 Mg_chelatase nSTAND3 AAA_7 AAA_18 nSTAND_NTPase5 PhoH ResIII Torsin USP8_dimer
Other DBs
NCBI-GeneID: 18590343
NCBI-ProteinID: XP_007015856
UniProt: A0AB32US36 A0A061GUE0
LinkDB
Position
9:34316133..34323251
AA seq 437 aa
MYSNFKEQAIEYVKQAVQEDNAGNYSKAFPLYMNALEYFKTHLKYEKNPKIREAITQKFT
EYLRRAEEIRAVLDEGGPGPASNGDAAVATRPKSKPKDGSGGGEGGDGEDPEQAKLRAGL
NSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWRAFLLYGPPGTGK
SYLAKAVATEADSTFFSVSSSDLVSKWMGESEKLVSNLFQMARDSAPSIIFIDEIDSLCG
QRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPL
PDLKARQHMFKVHLGDTPHNLTESDFENLARRTEGFSGSDISVCVKDVLFEPVRKTQDAM
FFYKTPNDMWMPCGPKQPGAVQITMQELAGKGLAAQILPPPISRSDFDKVLARQRPTVSK
ADLEVHERFTKEFGEEG
NT seq 1314 nt   +upstreamnt  +downstreamnt
atgtatagcaatttcaaagaacaagcgatagagtacgttaagcaagcggtacaagaagat
aatgcaggcaactacagcaaagcctttcctttatacatgaacgcactcgagtatttcaag
acccatttgaaatacgagaagaaccccaaaatcagggaagcgattacccagaaattcaca
gagtatttgcgtcgggccgaggagatccgtgccgttctcgatgaaggtgggcctggaccg
gcttctaatggggatgctgctgttgccacgcgccctaaaagtaagcccaaggatggtagt
ggcggtggagaaggcggtgacggggaggatccggaacaggctaagttgagagctgggctt
aattcggctattattagggaaaagcctaatgtcaagtggaatgatgtagctggattggaa
agtgctaagcaggctttgcaagaagctgttattttgcctgtcaagtttcctcagtttttt
actggaaaaagaagaccatggagagcttttctgttgtatgggccacccggtactggaaag
tcatacttggccaaggccgtggcaactgaagcagactctacattttttagtgtttcatca
tcagaccttgtgtcgaagtggatgggggagagtgaaaagctggtttcaaacctttttcag
atggctcgcgatagtgctccttccatcatattcattgatgaaatagattccttgtgtggt
cagcgtggagagggcaatgagagtgaagcgtcaagacgtatcaaaaccgaacttcttgtg
cagatgcagggtgttggacataatgatcagaaagtcctagttcttgctgcaaccaatact
ccctatgcacttgatcaggccatccgccggcgttttgataagcgcatttacattcctctc
ccagatttgaaggctcggcaacatatgttcaaagtgcatttaggtgacactcctcacaac
ttgactgaaagtgattttgaaaacttagctcgccggacagaggggttttcagggtccgac
atatctgtttgtgttaaggatgttctttttgaacctgttcgtaaaacccaagatgccatg
tttttctacaagacacctaatgatatgtggatgccatgtggaccaaagcaaccaggtgct
gtccaaattactatgcaggagttggcaggcaaaggacttgcggcacagatccttccgcct
cctatttccagatcagattttgataaggtgcttgcaagacagaggccaacagtgagcaaa
gctgatcttgaggtccatgaaagatttacaaaggagtttggagaggaaggctga

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