KEGG   Theobroma cacao (cacao): 18590405
Entry
18590405          CDS       T02994                                 
Name
(RefSeq) splicing factor U2af small subunit B
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    18590405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tcc03041]
    18590405
Spliceosome [BR:tcc03041]
 Complex A
  U2 snRNP components
   U2 related factors
    18590405
 Complex B
    18590405
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 HATPase_c DNA_alkylation Torus
Other DBs
NCBI-GeneID: 18590405
NCBI-ProteinID: XP_017983076
UniProt: A0AB32WWL2
LinkDB
Position
9:complement(34731380..34734640)
AA seq 318 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
GVENQGNPIDPRKIQEHFEEFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE
HAANALRNLSGRFYSGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKTISREL
RRQLFGRYRRRRSHSQSRSRSPPKHRGSHEERSHGGRGHIRRYGDRDHYHESRSKRHRST
SPGHRRGRSRSPGGKRNRSPVREGSEERRAKIEQWNREREQENANRVDNDAANNNNENGN
NGYAKNDDKYYGHQQQQE
NT seq 957 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcatcgatatttggtacggaaaaggatagggtcaactgcccgttc
tatttcaagataggcgcttgtcgtcacggagaccggtgctcgcgtctccacaccaagccc
agcatcagcccgactctccttctctcaaacatgtaccagcggcccgacatgatcaccccc
ggcgtcgaaaaccagggtaaccccatcgacccccgcaagatccaagaacatttcgaggag
ttttatgaggatttatttgaggaactgagcaagtacggtgaaattgagagtctgaatata
tgcgacaacttggctgaccatatggtgggcaatgtgtatgttcagtttagagaagaagaa
catgccgcaaatgcgctcaggaatcttagtggaagattttattctggccgtcctatcatt
gttgacttctcacctgtgactgacttccgtgaagccacctgtaggcagtatgaagagaat
acttgcaatcgtggtggatattgcaatttcatgcacctgaaaacaatcagcagggagttg
aggcgccagttatttgggaggtatagaaggaggcgaagccatagccaaagcagaagcaga
agccctccaaagcatcgtggtagccatgaggaacgctctcatggtgggcgtggccacatt
agacggtatggtgatagagatcattatcatgaaagccggagtaaaaggcatagaagcact
agtcctggccataggagaggacggagcagaagccctgggggaaagagaaatcgtagtcca
gttcgtgaaggcagtgaggagaggcgtgcgaaaattgagcaatggaaccgtgaaagggag
caagaaaatgctaacagagttgataatgatgctgccaataataacaatgagaatggtaac
aatggatatgcaaagaatgatgataagtactatggacatcagcagcagcaggagtag

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