KEGG   Theobroma cacao (cacao): 18590411
Entry
18590411          CDS       T02994                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
tcc  Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tcc03400]
    18590411
DNA repair and recombination proteins [BR:tcc03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    18590411
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-RING_2 DEAD zf-C3HC4_4 Prok-RING_4 zf-RING_5 RING_XB3-XBAT31 ResIII zf-RING_4 zf-ANAPC11 UBA_Rad5 zf-RING_11
Other DBs
NCBI-GeneID: 18590411
NCBI-ProteinID: XP_007015968
UniProt: A0AB32USK3
LinkDB
Position
9:complement(34785315..34793791)
AA seq 1034 aa
MGGSKVTEDLISTVRSIVGLEHSEMDIIRALHLAKNDATAAINIIFDSPPNLKPREKQPE
PETPNSSSHTTSVSVNPKKSGKDYKNSSFSSNGNVTCGASIVEDEEDATVENDWWLVGSS
EVPGLSTSKGRKVKAGDEVCFTFPLKSSSSSPAGPVGKGFGRGRPAAAACSEIVRFSTKN
SGEIGRIPNEWARCLLPLVRDKKVKVEGRCKSAPDVLGIMDTIVLSLSVYINSSMFHKYQ
QTSLKAASNSTEESVFHPLPNLFRLLGLTPFKKAELAPGDLYTKKRPLETKDGSGLHTPL
LPTNRFKNQSQSGNEVENEESISDADLDHIVGVGDNSELEEMDPPGTLQCELRPYQKQAL
HWLIQVEKGHCLDEAATTLHPCWEAYRLADKGEPVVYLNVFTGDATIEFPSTNQMARGGI
LADAMGLGKTIMTIALLVTYSERGGLSDSQSPDQLSDQGGEVSDIFGQSSNSVKNATKFC
DFDKLLKQKNKLVNGGNLIICPMTLLGQWKAEIETHVQPGSLSLYVHYGQSRPKDAKLLA
QNDVVITTYGVLASEFSAENSEDNGGLYSVWWFRVVLDEAHTIKSSKSQISMAATALVAD
RRWCLTGTPIQNKLEDLYSLLRFLRVEPWGNWPWWNKLIQKPFEEGDERGLKVVQSILKP
IMLRRTKCSTDRDGKPILVLPPADIQVIYCELTEAEKDFYEALFKRSKVKFDQFVEQGRV
LHNYASILELLLRLRQCCDHPFLVMSRGDTQEYSDLNKLAKRFLRGGQNTLEGEAKVLPS
RAFVQEVVEELRKGEQAECPICLEAFEDAVLTPCAHRLCRECLLASWRNPNSGLCPVCRK
TVARQDLITAPTESRFQIDIEKNWVESTKVVVLLQELENLRSSGSKSILFSQWTAFLDLL
QVPLTRSNIPFLRLDGTLNQQQREKVIKQFSEDSNILVLLMSLKAGGVGINLTAASNAFV
LDPWWNPAVEEQAVMRIHRIGQTKRVAIKRFIVKGTVEERMEAVQARKQRMISGALTDQE
VRTARIEELKMLFT
NT seq 3105 nt   +upstreamnt  +downstreamnt
atgggaggaagcaaggtgacggaggatctcatttcaaccgtccgatcaatcgtcggatta
gagcattccgagatggacataatcagagccctacacttggccaaaaacgacgccaccgct
gccatcaacataatttttgactcgcctcccaatttaaagcccagagagaaacaacccgaa
cccgagactccaaattcgagctcccatacgacgtcggttagtgtaaacccgaagaaatcg
ggtaaagattataagaattctagttttagtagtaatggaaatgttacttgtggtgcaagt
attgtggaagatgaagaggatgctacggttgaaaatgactggtggcttgtgggctccagc
gaagtacccggactttcaacgagtaaagggaggaaagtgaaggccggggatgaagtttgt
tttacgtttccattgaagagtagcagctcgagtccggccgggccagtcgggaaaggtttt
gggagaggaaggccagcggcagcggcttgttcagagattgttaggttctctaccaagaac
tctggggagattggtagaatacccaatgagtgggcacgatgtttgttgccgcttgtgagg
gataaaaaggttaaagttgaggggcggtgcaaatcagctccggatgtgttgggaattatg
gatactattgttttatctttaagtgtgtacattaatagttccatgttccataagtatcag
cagacttcactcaaggcagccagcaattccactgaggaatctgtttttcaccctctccca
aatttgttccggttgcttggcttaaccccctttaagaaggcagaattagctcctggtgat
ttgtatacaaagaagcgacccttggaaactaaggatggttctggtcttcataccccattg
ttacctacaaacaggtttaagaatcaatctcaaagtggaaatgaggttgaaaatgaggag
tccatctctgatgctgatcttgaccatattgttggtgttggagataactctgagttagag
gaaatggatccccctggcaccctccagtgtgaacttcgcccttaccaaaagcaggccctc
cactggctgattcaggtggagaagggacattgcttggatgaggcagctacaacccttcac
ccttgctgggaagcatatcgcttagcagataagggggagcctgttgtatacttgaatgtg
tttactggtgatgctacaatagaattcccaagtacaaaccaaatggctagaggaggaatt
ctggcggatgctatgggtcttgggaagacaatcatgacaatagccctcctagtaacctat
tcagaaagaggtggtctatcagatagtcaatccccagatcagctttctgatcaaggtggt
gaagtcagtgatatttttggccaatcatcaaattccgtgaaaaatgcaacaaaattctgt
gactttgataagttgttgaagcaaaagaacaaacttgtgaatggtggcaatctgattata
tgtcctatgactcttcttggccaatggaaggcagagattgaaactcatgtgcaaccaggg
tctttgtctttatatgttcattatggacaaagtaggccaaaggatgcaaaacttcttgct
cagaatgatgttgtaattactacatatggagttctagcttcagaattttcagcagagaat
tctgaagataatggaggactatactcagtttggtggttcagggttgttcttgatgaagca
cataccataaagtcctctaaaagtcaaatttccatggctgccactgctttagttgctgat
cgtcgctggtgtctcacaggcactccaatccagaacaagctggaggatttatacagtctt
ctccggtttttgagggtggaaccttggggaaactggccctggtggaacaaactcatccaa
aaaccatttgaggagggtgatgagagagggctaaaggtggttcaatcaatcttaaagcca
atcatgttaaggcgaacaaagtgtagcacagatagagatggcaagccaattctagtcctc
cctccagctgatattcaggtgatatactgtgagctcactgaagctgaaaaagacttttat
gaagccctatttaaaagatcaaaggtgaagtttgatcaatttgttgagcaaggacgtgtt
cttcataattatgcttctattttggagttacttctacgtttacgtcaatgttgtgatcat
ccattccttgtgatgagccggggagatacacaagaatactcagatctgaataagctagct
aaacgattccttagaggtgggcagaataccctggaaggggaagccaaagttttgccttcg
agggcatttgttcaagaggtggttgaagagctgcgcaagggggaacaagcagagtgtcca
atatgtctcgaagcttttgaagatgctgtattgactccatgtgctcaccgcttatgccgt
gagtgcctcttggcaagttggcgaaatccaaattctggtttatgtcctgtttgtaggaaa
actgttgctaggcaagatcttattacagccccaactgagagtcggttccagattgatatc
gagaaaaattgggtggagtcaactaaggttgttgttctgttgcaagaacttgaaaatctt
cgttcgtcaggctctaagagcatcctcttcagccagtggactgcatttttggacctcttg
caggttcctcttactcggagtaacattccctttcttcgactggatgggactttgaatcaa
cagcagcgtgaaaaagtaataaaacaattttcagaagatagcaacatcctggtgttgttg
atgtcattgaaggctggtggggttggaattaacctaactgcagcttccaatgcctttgtc
ttggatccatggtggaatccagctgtagaggaacaagctgtgatgcgcatccatcgcatt
gggcagactaaaagggtggcgatcaaaaggttcattgtcaagggaacagtggaggaaaga
atggaggcagtgcaagcacgcaagcaaaggatgatatctggtgccttaactgatcaagaa
gtacgaacagcccgtattgaggaactgaaaatgcttttcacttaa

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