Theobroma cacao (cacao): 18590844
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Entry
18590844 CDS
T02994
Name
(RefSeq) non-structural maintenance of chromosomes element 1 homolog
KO
K22817
non-structural maintenance of chromosomes element 1 [EC:
2.3.2.27
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcc04121
]
18590844
03400 DNA repair and recombination proteins [BR:
tcc03400
]
18590844
Enzymes [BR:
tcc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
18590844
Ubiquitin system [BR:
tcc04121
]
Ubiquitin ligases (E3)
Atypical E3
18590844
DNA repair and recombination proteins [BR:
tcc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
18590844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_Nse1
zf-RING-like
Baculo_IE-1
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
18590844
NCBI-ProteinID:
XP_007016672
UniProt:
A0AB32UT21
LinkDB
All DBs
Position
9:37177280..37179698
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AA seq
326 aa
AA seq
DB search
MAVLNWKHHALIQSLLSRGPLKEKEFHSIFTGITGQNPGTHQEKFNDYLLKINRELSFVQ
LDLRACRDQYDGQVYYGVVNNVSDEQSKLGTRYSVPQIAFFKAIIEAIAQDVTAQGTISN
IDALNIKLENQVLNSLGSQSQDGSLNVPAAFRNFTLSQKEKTLDQLVQDKWLCFTEDGNV
GVGVRSILDLRSWFRNAEVPSCEVCNEAGLKAKLCPNEGCTVRIHQYCLKRRVCQRGVIV
CPSCDTQWQYQPPKAEPIELEDEASGPTQSQPPSRSTQSQPPLRSRRKRQRLSQNDDAET
AGCSSQAASQADSDMRRVTRSSARLR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgctaaattggaagcaccacgcgctcattcaatcgttgctatcacgtggccct
ctaaaggaaaaggagttccattccatcttcactggcatcactggtcaaaatccaggtacc
catcaagaaaaatttaatgattatcttctcaagataaacagggaactttcgtttgttcag
ttggatttaagggcttgtagagatcaatatgatggtcaagtttattatggagttgtcaat
aatgtttccgacgaacaatcaaagcttggaaccagatattctgtcccacaaattgctttc
tttaaggccattattgaggcaatagcacaagatgttacagcgcagggtaccatatccaac
attgatgctctcaatattaaattggagaaccaggttcttaacagcttaggatcacaatct
caggatggttcacttaatgttcctgctgcattcaggaatttcacattgtctcagaaggaa
aaaactcttgatcaacttgtgcaggacaagtggctttgtttcactgaagatggtaatgtt
ggagttggtgtcaggtccattcttgatctgcgcagttggttccgtaatgctgaggttcct
tcatgtgaagtgtgcaatgaagctggattgaaggccaaattgtgccctaatgaaggttgt
acagttcgaattcaccagtactgcctaaaaaggagagtttgtcagaggggtgtaatagtt
tgtccaagttgtgatactcagtggcaatatcaaccacccaaggcagaacccatagaacta
gaggatgaagcaagtgggcccactcaaagccagccaccttccagatccactcagagccag
ccacctctaagatccaggagaaagaggcaaagactcagccaaaatgatgatgcagaaacc
gcaggatgtagttctcaggctgcatcacaagctgattctgatatgagaagagtaactagg
agttctgcacgcctgaggtga
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