KEGG   Theobroma cacao (cacao): 18590857
Entry
18590857          CDS       T02994                                 
Name
(RefSeq) UBP1-associated protein 2A
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    18590857
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tcc03019]
    18590857
   03041 Spliceosome [BR:tcc03041]
    18590857
Messenger RNA biogenesis [BR:tcc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     18590857
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     18590857
Spliceosome [BR:tcc03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    18590857
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8 DUF6584
Other DBs
NCBI-GeneID: 18590857
NCBI-ProteinID: XP_007016699
UniProt: A0AB32UTK9 A0A061H080
LinkDB
Position
9:complement(37266162..37269982)
AA seq 500 aa
MAKKRKQRSSEPEPTKTTPDRQPIQEEEQQQQPEYVADEDPNAKVEEEQQLQEVEEEVEE
EVEEEVEEEEEEEEEEEENEEDDDEEAENQTLVGSSNAAVQNGVPKETSQEEELDDEPFE
KLLEPFGKDQLITLIKKAVEKHPEFMSSVREFADADPAHRKIFVHGLSWDTTAETLTAEF
IKYGEIEECKAVTDRVSGKSKGYAFILFKHRSGARRALKQPQKKIGNRITSCQLASQGPV
PAPPPSAPPVSEYTQRKIFVSNVSAEVDPEKLLEYFRQYGEIEEGPLGLDKQSGKPKGFA
LFVYRSIESARRALEEPHKNFEGHVLHCQKAIDGPKPNKGGYGGSGSGGHHQYQQHQQGQ
HQMQPHYHHAKKGKYSTGGSDTGHLMAPSGPAAVGFNPGVAAAGFNPGVAAAAPALNPAL
GQALTALLATQGAGLGLGNLLGGLSGAPVNQGAPAAGYGNQVAGGYGSQMGVQGGYQNPQ
MGQGGAGRTQPGGGAPYMGH
NT seq 1503 nt   +upstreamnt  +downstreamnt
atggcgaaaaagcgaaagcagcgatcgtctgaaccggagcccaccaaaacgacgccggat
cgtcaaccaatccaagaagaagagcaacagcaacaaccggaatacgtagccgacgaagat
ccgaacgctaaagtagaagaagaacagcagctacaagaagttgaagaggaagtagaagaa
gaagtagaagaggaagttgaagaagaggaagaggaggaagaggaagaagaagagaacgaa
gaagacgatgacgaagaagctgaaaaccaaaccctagtcggttcctccaacgccgctgtt
caaaatggagtacccaaagaaacgagtcaagaggaggaattggacgacgagccgttcgag
aaacttctagaaccatttgggaaagatcaattgattacccttattaagaaagcggtcgag
aagcacccggaattcatgtcgtcggttcgggagttcgcggatgcggatccagctcatcgg
aagatattcgttcatgggctcagttgggataccactgctgaaaccctcaccgccgagttt
attaaatatggggaaatcgaagaatgtaaagcggttactgatagggtttctgggaaatcc
aaaggttacgcgtttattctatttaagcatcggagtggggcacgccgggctttgaaacaa
ccccagaagaagattgggaatagaatcacttcttgccagttggcttcgcagggaccagtt
cctgcaccgcctccctctgctcctccggtttctgagtatactcagaggaaaatttttgtt
agtaatgtgtcagctgaagtggacccggagaagttgcttgagtattttagacagtatgga
gaaattgaggaaggtccgttggggcttgataagcagtcagggaaacctaaagggtttgct
ctttttgtatacaggtcgattgagagtgccagaagggccttagaggagcctcataagaat
tttgaaggtcatgttttgcattgccaaaaggctatagatgggccgaagccaaataaaggt
ggttatggaggaagtggttctggtgggcatcatcagtaccagcagcatcagcaaggacaa
catcagatgcagcctcattaccatcatgctaagaagggaaagtattcgactggtggatca
gatactgggcatttgatggctccatctgggcctgctgcagtggggttcaaccctggagtt
gctgctgctgggtttaaccccggggtggctgctgctgcaccggctttgaacccggcactt
ggacaggcattgactgcgttgcttgctactcagggagccggtttgggccttggtaatctg
cttggcgggcttagtggggcgcctgtgaaccagggagcacctgctgcagggtatgggaat
caggttgcaggtggctatggaagccagatgggagtgcagggtgggtatcagaacccgcag
atggggcagggcggtgctggtaggactcagcctggtggcggtgcaccttacatggggcac
tag

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