Theobroma cacao (cacao): 18590897
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Entry
18590897 CDS
T02994
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
18590897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18590897
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
18590897
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
18590897
NCBI-ProteinID:
XP_007016781
UniProt:
A0AB32UTN5
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Position
9:complement(37507774..37511359)
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AA seq
256 aa
AA seq
DB search
MDAKPGSAPTTYSPSLTQKTRPPIFKGNDLDWVRPDGRGFHQCRPAFFRTGAVNSASGSA
YAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCNVSYTTFATPVRGQGSDHKEFSSMLHK
ALEGAIMLETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVAAVSVSCL
GKNLVIDPILEEESYQDGSLMLTCMPSRYEVTQLIFTGEWSTPDINEAMQLCLDACGKLG
KVMRSCLKEATSASQE
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaaaacccggttcagctccgacaacgtattccccgtctctgactcagaaaacc
cgaccacccattttcaaaggcaacgatctcgattgggttcgaccagatggccgcggcttc
catcagtgccgacccgcatttttcaggacaggtgctgtaaattctgcttctggatctgct
tatgctgagtttggaaataccaaggtcattgtgtctgtatttggaccaagagaaagcaag
aaagcaatgatgtacagtgatattgggcggttaaattgtaatgtcagctatacaactttt
gccactccagttcgaggacagggatcagaccacaaagagttttcctcaatgcttcataaa
gctttggaaggtgcaataatgttggaaacattccccaagaccaccgtggatgtttttgca
ttggtgttggaatctgggggcagtgatcttcctgtagtgatatcatgtgctagtcttgcc
cttgcagatgcagggatcatgatgtatgaccttgttgctgcagtttctgtgtcctgtcta
gggaaaaatctcgtgattgatcctattctcgaagaggaaagctaccaagatggaagctta
atgcttacatgtatgccttctcgttatgaggtcactcaattaatatttacaggagaatgg
tcaaccccagatattaatgaggcaatgcagctttgccttgatgcttgtggtaagcttggt
aaagtcatgaggtcatgcttgaaggaagctacgtctgcttcacaagagtaa
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