Theobroma cacao (cacao): 18590988
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Entry
18590988 CDS
T02994
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tcc01009
]
18590988
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcc03021
]
18590988
Enzymes [BR:
tcc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
18590988
Protein phosphatases and associated proteins [BR:
tcc01009
]
HAD phosphatases
Fcp/Scp phosphatases
18590988
Transcription machinery [BR:
tcc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
18590988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
18590988
NCBI-ProteinID:
XP_007016929
UniProt:
A0AB32UTK7
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Position
9:complement(38021152..38024818)
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AA seq
607 aa
AA seq
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MAKEQSISVSEAVHKIQLHLLDGIRDEKQLLASGSLISRSDYEDVVTERTISNTCGYPLC
ANPLPSEPRRKGRYRISLKEHKVYDLQETYLFCSTNCLINSRAFAGSLQEERCSVLNHAK
LNDILSLFGDLDLDDNDLGKNGDLGFSNLRIKENEEVKAEDVSLAGPSNAIEGYVPQREL
ISKPTPPKNNKNKVFDSSSSKLGSKKEEYFVNNELDFAGTIIMNDEYTISKKPGSFKQGD
RTKLSSKKEDFVINEMDFTSEIIMNDEYTISKMPSGSKQSCFDSNLKEVEERGICKDSED
KCVISGSSSALREKDSSIVELPSTKNVYQSGLDTSSAEAEKETHADKAVTSSETVLKSSL
KSAGAKKLNRFVTWADKKKADNAGNGNLCEVKEMETMKGDSEICGSAEDGGDDNMLRFVS
AEACAMALSKAAEAVASGDSDVTDAVYENGLIILPSLCEADKEEPMEDGDMLEPETAPVK
WPKKPGIPHSDMFNSEDSWFDAPPEGFSLTLSTFATMWNALFEWITSSSLAYIYGRDESF
HEEYLSINGREYPRKIALRDGRSSEIKETLASCISRALPAIVTDLRLPIPISTLEQGMNT
CPHSTYD
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggaacaatcaatctccgtatcggaagccgtacacaagattcaactccacctc
ctcgacggaattcgtgacgagaaacagctactggcctccggttccttgatttctcgaagc
gactacgaggatgtcgtgaccgaaaggaccatttccaacacctgcggttaccctctgtgc
gccaaccccttaccttccgaaccccgccgaaaaggccgctaccgaatctctttaaaagaa
cacaaagtttacgatttgcaagaaacttacttgttttgctccactaattgcctaattaat
agccgagcttttgctgggagtttacaagaagagaggtgttcggttttgaatcatgcgaaa
ctgaatgacattttgagtttgtttggggacttggatttggacgataatgatttggggaag
aatggggatttagggttttcgaatttgaggattaaagagaatgaggaagtaaaagctgag
gatgtttcgttggcgggtccttccaatgctattgaaggctatgttccgcaaagagaattg
atttctaagcctacacctcctaaaaataacaaaaacaaagtgtttgattctagtagttcc
aagctgggtagtaagaaagaagaatattttgttaataatgagttggactttgctggtact
ataattatgaatgatgaatataccatttcgaagaaaccaggtagttttaaacagggtgac
agaacgaagctgagtagtaagaaagaagattttgttattaatgagatggactttactagt
gaaataatcatgaatgatgaatataccatttcgaagatgccctcagggtcaaaacagagt
tgttttgattcaaatttgaaagaagtggaagaaagaggaatttgtaaagactctgaggac
aaatgtgtgatatcaggatcatcctctgctttgagggaaaaggattctagcattgtagaa
ttgccttcaactaaaaatgtctaccagagtggtttggatacaagtagtgctgaagcagag
aaggaaacccatgctgacaaggcagtgacatcaagtgaaacagtgcttaaatcctccctt
aaatctgccggagccaagaaacttaatcgctttgttacttgggccgataagaagaaagct
gacaatgctgggaatggcaatctttgtgaagttaaagaaatggaaactatgaaaggagat
tctgaaatatgtggcagtgcagaagatggtggtgatgataatatgttacgatttgtatca
gcagaagcttgtgctatggcgttgagcaaggcagcagaagctgtggcatctggagattct
gatgtcactgatgctgtttatgaaaatgggcttatcatattgccatctctatgcgaggcg
gacaaggaggagcctatggaggatggtgatatgcttgaaccagaaacagcccctgtaaag
tggcccaaaaaacctgggattccacattctgatatgtttaactcagaggactcatggttt
gatgctcctccagagggtttcagtttgactctatcaacttttgcaacaatgtggaatgca
ctttttgaatggataacatcatcttctttggcttatatatatgggagagatgaaagtttc
catgaagaatacctatcaattaatgggagggagtatccacggaagattgccttacgagat
ggtcgttcttctgaaattaaagaaactcttgctagctgtatttctcgtgctttacctgct
attgttactgatctcagactgccaataccaatatccactttggagcaaggaatgaatacc
tgccctcactccacatatgactaa
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