Theobroma cacao (cacao): 18591064
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Entry
18591064 CDS
T02994
Name
(RefSeq) putative tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcc03016
]
18591064
Enzymes [BR:
tcc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
18591064
Transfer RNA biogenesis [BR:
tcc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
18591064
Prokaryotic type
18591064
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
18591064
NCBI-ProteinID:
XP_007017040
UniProt:
A0AB32UTV8
LinkDB
All DBs
Position
9:complement(38324208..38327689)
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AA seq
507 aa
AA seq
DB search
MAISCLRAPLAPWLMKTRNPPPLKLPCPRIQLRFLCSSSTAQPLPPASPKWEPFRKKKVV
MRVGYVGTNYRGLQVQRDEHQLSTIENELETAIFKAGGIRDSNYGDLHKIAWARSSRTDK
GVHSLATMITLKMEIPEDAWKEDPNGIALAKCVNSYLPDSIKVFSILPSQKSFDPRRECN
LRKYSYLLPAEIIGIKSHFSEAEINHHISDFNSILNCFEGEHPFHNYTQRAKYRRQIPPR
QTARNGRVPKGAEAHDESSTSELEESDVEEDPRIEETTTLNSEEKSTSFDEPLVDCCDGQ
GNSLQYQSSNVVVRARWLYEPDETDRITASHFRKIFLCSCGRLENSMGFDYIEISIWGES
FMLHQIRKMVGTAVAVKRNLFPRDILTLSLAKFSRIVLPLAPSEVLILRGNTFILRKMPS
NITRPEMLTMVESEEILKEVDKFYRSVLLPQVSKFLDPSKSPWKEWVENLDANTSVPDAE
LDEVRTAWKLWKEKLLNGTASASAVGE
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggccatctcttgtcttcgagccccgctggctccatggctcatgaaaactcgaaatcct
cctcctttgaaactaccatgtccgagaatacagttacgattcctttgcagctcctccacc
gctcagcccctccctcccgcctccccaaagtgggaaccttttcgcaagaaaaaggtcgtc
atgcgcgtcggctacgttggtaccaactaccgaggtcttcaagtgcagcgagatgaacac
cagctttctaccattgaaaatgaactagaaactgccattttcaaggctggaggaatccgt
gatagtaactatggtgatctgcacaaaattgcctgggccagaagcagccgaactgataaa
ggagttcactctttggcaacaatgataacattaaaaatggagatacctgaagatgcctgg
aaggaagaccctaatggcattgctctggctaaatgcgttaactcttatcttcctgacagt
atcaaagttttcagcatattgccttcacaaaagagttttgatcctagaagggaatgtaat
ctccggaaatattcttacctcctaccagctgaaattattggaataaaaagtcacttcagt
gaagctgaaattaaccatcacatatcagacttcaacagcatattaaattgttttgagggc
gaacaccctttccataactatactcaaagggcaaagtacagaagacaaattcctcctagg
caaacagctagaaatggtcgtgtgccaaaaggagctgaagcacatgatgagtcatcaact
tctgagttagaggaaagtgatgtagaagaagatcccaggattgaggaaacaactacacta
aatagtgaggaaaagtccaccagttttgatgaacctctggttgactgttgtgatggtcag
ggaaacagtttgcagtatcaaagttctaatgtagttgttcgagcaagatggctatatgaa
cctgatgagacagatagaataacagcttcccactttagaaaaatttttctctgttcttgt
ggaaggctggagaactcaatgggatttgattatattgaaatttccatatggggggagtct
ttcatgttgcatcagatccgcaaaatggttggtactgctgttgctgtgaagcgcaattta
ttcccaagagacattctaacactatcactagccaagttctcgcggattgtcctaccactt
gctccatctgaagttctaattttgagggggaacacattcatattgagaaagatgcccagt
aatataacaagacctgagatgctgacaatggtcgaatcagaagaaatcctcaaggaagtt
gacaagttctacagatctgtattgttgccacaagtttcaaaattcttggacccttctaaa
tctccctggaaagaatgggttgaaaatttagatgcaaacacaagcgttcctgatgcagag
ttggatgaagtcaggactgcttggaagctgtggaaggaaaagttgctgaatggaacagct
tctgcatcagcagtgggcgaataa
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