Theobroma cacao (cacao): 18591478
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Entry
18591478 CDS
T02994
Name
(RefSeq) coatomer subunit alpha-1
KO
K05236
coatomer subunit alpha
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcc04131
]
18591478
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tcc04147
]
18591478
Membrane trafficking [BR:
tcc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
18591478
Exosome [BR:
tcc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
18591478
Exosomal proteins of bladder cancer cells
18591478
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
TPR_COPA_B
WD40_Gbeta
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_WDR41
Beta-prop_Aladin
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_At4g14310
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
18591478
NCBI-ProteinID:
XP_007017678
UniProt:
A0AB32UU45
LinkDB
All DBs
Position
8:complement(1586619..1591876)
Genome browser
AA seq
1219 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCIAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALKKKTVAPADDILR
LGQLSQMNTDFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTK
AWEVDTMRGHMNNVSCVLFHSRQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILA
CHPEMNLMAAGHDSGMIVFKLERERPAFSVSGDSMYYVKDRFLRFYEFSTQKDTQVIPIR
RPGSTSLNQGARTLSYSPTENAILVCSELDGGSYELYIIPKDSFGRGESVQDAKKGIGGS
AVFVARNRFAVLDKSSNQVLVKNLKNEIVKKVAIPIIVDSIFYAGTGNLLCKAEDRVIIF
DLQQRMILAELQTSFVRYVVWSNDMESVALLSKHSIIIANKKLVNQCTLHETIRVKSGAW
DDNGVFIYTTLTHIKYCLPNGDNGVIRTLDVPVYITKVSGNTMCCLDRDGKNRAIVFDAT
EYVFKLSLLKKRYDHVMSMIRSSELCGQAMIAYLQQKGFPEVALHFVRDERTRFNLALES
GNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFDRLSFLYLITGNMDK
LSKMLKIAEVKNDVMGEFHNALYLGDIKERVKILENAGHLPLAYITAAVHGLHDIAEHLA
ADLGDDIPSLPEGRSPSLLTPPSPVLCGGDWPLLRVMRGVFEGGLDNVGRNAQEEDEEAA
DADWGEDLDIVDVENMPNGDVSMALVEEAHEENDEGGWDLEDLELPPEMGTPKTAGNAHS
SVFVAPTPGMPVSQIWIQKSSLAAEHAAAGNFDTAMRLLSRQLGIRNFAPLKQLFLDLQV
GCHSYLPTFSSAPVTLVAVERGWTESASPNVRSPPALVFKFYQLEEKLKAGYKATTSGKF
TEALRLFLSILHTIPLIVVDSRREVDDVKELIIIVKEYVLGLQMELKRRELKDNPVRQQE
LAAYFTHCNLQPPHMRLALLNAMTVCYKNGNLMTAANFARRLLETNPTNENQAKTARQVL
QAAERNTNDKVQLNYDFRNPFVVCGATYVPIYRGQKDVCCPYCSSRFVPSQEGQLCPVCD
LAVVGSDASGLLCSPSQMR
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaaatttgagacgaagagcaatcgggtgaaagggctgagctttcacagcaag
agaccatggatcttagcgagtctacacagcggcgtgatccagctgtgggattataggatg
gggactctcattgatcgattcgacgagcacgatggccccgtccgtggcgtccatttccac
aagtcccagcctctctttgtctctggaggggatgattacaagatcaaagtttggaattat
aaactgcatagatgtctgtttacacttcttgggcacctggattatatacgtactgttcag
tttcatcatgagtatccatggattgttagtgcaagtgatgaccaaacaatcagaatatgg
aattggcagtctcggacttgcattgcagtgctaactggacacaatcactatgtcatgtgt
gcctcattccatcctaaggaggacttggttgtttcagcatccttggaccaaacagttcgt
gtgtgggatattggcgccctgaagaagaaaacagttgcccctgccgatgacatcctgcgt
ttgggtcagttgagccagatgaacacagatttctttggtggggtggatgctgttgttaaa
tatgtcttggagggtcatgatcgaggagttaactgggcctcgttccatcccactcttcct
ctaattgtctcaggggcggatgatcgacaagtgaaactttggcgaatgaatgatacaaag
gcttgggaagttgacactatgagagggcacatgaataacgtgtcatgtgttttattccat
tcaaggcaggacatcattgtgtctaattcagaggataagagtattcgagtgtgggatgct
accaagcgtactggccttcagacatttcgcagggagcacgacaggttctggatacttgca
tgtcatcctgagatgaaccttatggctgctggtcatgatagtggcatgattgttttcaaa
ctggagagggaacgccctgctttttctgtgagtggtgattcaatgtactatgttaaagac
cggtttttgcgcttttatgaattctcaactcagaaagacactcaggtgatcccaatccgt
aggcctggttctaccagtttaaaccaaggggcaagaacactttcttatagccccacggaa
aatgctattttggtctgttcagaattggatggaggctcctatgaactttacattatacct
aaagacagttttggcagaggtgagtctgttcaagacgcaaaaaaaggtattggtggatca
gcagtttttgttgctcgaaataggtttgctgtgcttgacaagagcagcaatcaagtatta
gtcaagaaccttaaaaatgagattgtgaaaaaagttgccattccaattattgttgattca
atattttatgctggaaccgggaacttgctatgcaaagcagaggatcgagtaattatcttt
gacctccaacagaggatgattcttgcagagcttcaaacttcttttgttaggtatgttgtt
tggtcaaacgatatggagagtgttgccctgctgagcaaacattcaatcataatagccaac
aagaagctcgtgaatcaatgtactctccatgaaacaatccgtgtaaagagtggggcttgg
gatgacaatggtgtcttcatatacactacactgactcacatcaaatactgccttcccaat
ggggacaatggagttattaggaccctcgatgtaccagtgtacatcacgaaagtgtctgga
aacaccatgtgttgcttggacagagatgggaaaaatcgtgccatagtatttgatgcaact
gagtatgtatttaagctgtccctcctgaaaaagagatatgatcatgttatgagcatgatt
aggagttctgagctctgtgggcaagccatgattgcatacctccagcagaaaggcttccct
gaggttgctcttcattttgtaagggatgaaaggacacgcttcaacttggcactagagagt
gggaacatccagattgcagttgcttctgccaaggaaattgatgagaaagatcactggtat
cgcttgggggtggaggcccttcggcagggtaatgcaggcattgttgaatatgcttaccag
aggacaaaaaatttcgacagactatcatttctctacctcatcacagggaacatggataag
ttatcgaaaatgctaaaaattgctgaagtcaagaatgatgtcatgggtgagttccacaac
gctctatacttgggtgatatcaaagaacgtgtcaagatattggaaaatgctggccatttg
ccacttgcttacatcactgctgcagttcatgggctccatgatattgctgagcatctagct
gctgacctgggagatgatattccctctttgcctgagggtagatctccatcccttttgaca
cctccaagtcctgtcttatgcggtggagattggcctttgttaagggtaatgagaggagta
tttgagggtggtcttgataatgttggcagaaatgctcaggaagaagatgaagaggctgct
gatgctgattggggtgaggatttggatattgttgatgtggaaaacatgccaaatggagac
gtcagtatggcccttgtggaagaagcacatgaagagaatgatgagggaggatgggatctt
gaggatcttgaacttccacctgaaatgggtactccaaaaactgctggcaatgctcattca
tctgtttttgttgcccctactccaggtatgcctgtaagtcaaatttggatccaaaaatca
tcccttgcagctgaacatgctgctgcaggcaattttgataccgccatgcgtttgttgagc
cggcaattgggtatcaggaatttcgctcccttgaaacaattattccttgacttgcaagtg
ggctgccattcttatcttcctaccttttcctctgcccctgtcactcttgtggcagtggaa
agaggatggactgaatcagcaagtcctaatgtaagaagcccgcctgctcttgtttttaag
ttttatcagctggaggagaagctcaaggccggttacaaggccacaacttctggaaagttt
acagaggctttacggctctttcttagtattcttcacaccattcctttgatcgttgttgac
tctaggagagaggttgatgatgtgaaggaattgatcatcattgtgaaggagtatgttctt
ggtttgcaaatggagcttaaaaggagggaacttaaggacaatcctgtacgtcaacaagag
ctagcagcctacttcacccactgtaaccttcagccacctcacatgagactggcattgctg
aatgctatgactgtttgctacaagaatggtaatctaatgacagctgctaacttcgcaagg
cgattgttggagaccaatcccaccaatgaaaaccaagcgaaaactgcccgtcaagtcctg
caagcggccgagagaaacacgaacgacaaagtccagctgaactatgatttcaggaaccca
ttcgtagtttgtggggcaacttatgtgcctatataccgtggacagaaggatgtctgctgc
ccttactgcagttcacggtttgttccatcccaggaaggtcagctttgtcctgtctgtgat
ctcgcagtggttggatcagatgcatctggtttactttgttccccttcccaaatgagatga
DBGET
integrated database retrieval system
