Theobroma cacao (cacao): 18591724 Help Entry 18591724          CDS       T02994                                  Name (RefSeq) Fanconi anemia group J protein   KO K15362   fanconi anemia group J protein [EC:5.6.2.3] Organism tcc  Theobroma cacao (cacao) Pathway tcc03440   Homologous recombination tcc03460   Fanconi anemia pathway Brite KEGG Orthology (KO) [BR:tcc00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     18591724    03460 Fanconi anemia pathway     18591724  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:tcc03400]     18591724 Enzymes [BR:tcc01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      18591724 DNA repair and recombination proteins [BR:tcc03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     BRCA1-B complex      18591724    FA (Fanconi anemia) pathway     Downstream FA components      18591724 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Helicase_C_2 DEAD_2 HBB Yippee-Mis18 Motif Other DBs NCBI-GeneID:  18591724 NCBI-ProteinID:  XP_007018074 UniProt:  A0AB32UUD9 LinkDB All DBs Position 8:complement(2793815..2804826) Genome browser AA seq 1222 aa AA seqDB search MTSAATGANINPKTVYHIAGIPVEFPYKPYGTQFTFMYRVISTLDRAQKDGHCHTLLESP TGTGKSLSLLCSTLAWQQKYKLKNLQGCLSHSTPAPEAITDPLGHGGGFIPETQPSSVPP SGISEPPQQSANSKNKKKKLAPTIYYASRTHSQISQVIREYRKTSYRVQMAVLASRKNYC TNPHVLGKQNIDEECKLLLSNREEGCFEFKNMHKVKCHPSLQKGGCHEAHDIEDLVKVGQ IVKGCAYYAARSMADDAQLVFCPYSYIINPVIRGAMDVDIKGAIIVLDEAHNIEDIARDA GSVDLEEDALLKLQTELEQLYMIDATIYQPLYEMIQDLMGWIEQRKSTLEKHEFRHYFSS WTGDKALRQLQEANISQQCFPILLDCATKAIKAASDTESDAPHLSGMSVITLEGLFSSLT YFFSRNGSHIFDYQLALQRYVKKDGENAFGNWTCSLSLWCLNPAVVFRDIAELSLSVILT SGTLSPMNSFSSELGVQFGNCLEAPHVIDVKSQVWSAIISHGPGNYRLDASYKTADTYAF QDALGKSLEEICKIVPGGSLIFFPSYKLMEKLCKRWRETGQWLRLNARKRLFVEPRGGNQ EEFDTVLKGYYDSVSGGKEPGLGRKKRIKKADHNAIESTEVTNHEGAAFLAVFRGKVSEG IDFSDDNARVVIVVGIPFPNINDIQIALKKKYNNTYKSSKNLLSGSEWYCHQAFRALNQA LGRCIRHKFDYGAIILLDSRFQEEKNRAYISKWLRPSVRSYESFEKSLEELRSFFRDVKD LVSKNKSDHCGQQLLPLAKYDATFPQMKPQIDLAIQTSVQVDKDQKTCKEYIDLECSSPK DSRCLETLSMTYSNEDPDLLMVKETPLVDSSISLASPGSLSKDGNSGSTIIQASTKSLDQ FLIHPMSSTSLNEVPSSYESVTMFTPEKDVNQNTSSLIPKIESPSNLSVCSYIHKRRESM GSPFINLVNEEGSDTPAQIPGSMSFKDNLLANRRRIEFGFEPCSVENKQKKSNVPQSLAT HNSCPAMDKRLQISCLLCRSPLGRPENHLYLSCLLTVSSKVYLLSLIKERFICCSSNTLT TVPVIITDISSVDPRLCNRTLEGDTGQGIWHEDDGCVFKNVFCPFCSSRNNCLGVQIKAA DENNVKWLKKILLFTDCVEIRNSEAAEDKAAKDKDLSQVDASTMDKTAILNSIDKFAYSP KQPDLGGWRTTKSKLKLSKRRG NT seq 3669 nt NT seq  +upstreamnt  +downstreamnt atgacgtctgcagcaaccggggccaacatcaatcctaaaactgtgtatcatattgcagga attccggtggaattcccgtacaagccgtacgggacgcagttcaccttcatgtacagagtc atatcaaccctggatcgagctcagaaagacggtcattgtcacaccttactcgagtcgccc accggtaccggcaaatcgctatcgcttctttgctccactctggcctggcaacagaagtat aagctcaagaatctccaaggctgtttgtctcactccacacctgcaccggaggccatcacc gatcctctcggtcacggcggtggttttatcccagaaacgcaaccttcaagcgttcctcca tcagggatttcagagccacctcaacaatcagcaaatagcaagaataagaagaaaaagttg gctcctacgatatattatgcttcgaggacacattcacaaatttctcaagtgattcgtgaa tacaggaaaacttcttaccgagtgcaaatggcggtattggcctcaaggaaaaattattgc acaaatccacatgttcttgggaagcagaatattgatgaagaatgcaagctgcttttgagc aatcgagaggaaggatgttttgaatttaaaaatatgcataaagtcaaatgtcatccctca cttcagaaaggaggctgtcacgaggcccatgatattgaagatcttgtcaaagttggacaa attgttaaaggatgtgcatactatgctgcacgttccatggctgatgatgcgcaattagtt ttttgcccgtatagctacatcatcaatcctgttattcgaggagcaatggatgtagacatt aaaggagccattatagttcttgatgaagctcacaatatagaggatattgctcgtgatgct ggtagtgtggatcttgaagaagatgctttgctcaaattgcagacggagctagagcagctc tacatgattgatgccacaatttaccaaccactgtatgaaatgatacaggacctaatgggt tggattgagcagaggaaaagcacgttagaaaagcatgaatttcggcactacttctcctcc tggaccggtgacaaggcattaagacaactccaagaagctaacatttcacagcaatgcttc cccatcttgctagattgtgcaacaaaggcaatcaaagctgcttcagatacagagtcagat gcacctcatttaagtggcatgtctgtcataacattggaagggctgttctcttcactgaca tatttcttctcaaggaatggttctcatatatttgattatcagcttgctctacaaagatat gttaaaaaggatggcgaaaatgcttttggcaattggacatgttctttaagtttgtggtgc ttgaatccagcggttgttttcagagacattgctgaactttcattgtctgtcattttaaca tctgggacattgtcaccaatgaattccttctcatctgaacttggagttcagtttggaaac tgtttggaggctcctcatgttattgatgttaaatcccaggtgtggtctgctataatctcc catggtccaggtaattatcgattggatgcaagttacaaaacagcagatacatatgctttc caggatgcactcggcaaatccttagaagaaatttgcaagattgttccaggaggctctctg attttcttccctagttacaagctgatggagaaactttgcaagcgttggcgtgaaacaggc caatggttgcggcttaatgcaagaaagcgcctttttgttgagccaagaggaggtaatcag gaagaatttgacactgttctgaaaggttattatgattcagtatctggaggcaaggaacct ggtcttgggagaaagaaaaggattaaaaaagcagatcacaatgcaattgagtccacagaa gttactaaccatgaaggtgctgcttttcttgcagttttccgaggaaaggtctcagaaggc atagatttttctgatgataatgctagagtggtgatagttgttggcattccctttccaaat ataaatgatattcagattgctttaaagaagaaatataataacacttacaaatcatctaaa aaccttctcagtggaagtgagtggtactgccaccaagccttcagagctctaaatcaagct cttggacgctgtatacgtcataaatttgattatggagccatcatcctattagattcacgt tttcaagaagaaaagaatagagcttacatttcaaagtggctaaggccatccgttagaagc tacgaaagttttgagaagtcattagaggagctaagatcctttttcagagatgtcaaggac ctggttagcaagaacaagtctgatcattgtggacagcaactacttcctttggcaaaatat gatgccacctttccccagatgaagcctcaaattgatcttgcaattcaaacaagtgtgcaa gtagataaggaccagaagacatgcaaggaatatattgatctagaatgtagctctccaaaa gattcccggtgtttggagactttatctatgacatattccaatgaagatccagatttactc atggtcaaggaaacacctcttgtggattccagtatctctctagctagtcctggttcgtta tctaaggatgggaactctggttcaactataattcaggcctcaactaagtctttggatcaa tttttaattcatccaatgtcttcaacaagcctgaacgaagttccttcctcttatgaatct gtgacaatgttcacccctgaaaaagacgtcaatcaaaacacctccagcctgataccaaaa atagaatcaccttcgaatcttagtgtttgttcttatattcataaaaggagggaatccatg ggttcacctttcattaaccttgttaatgaagaaggatctgatactcctgcgcaaattcct ggttctatgagtttcaaggataacttactagcgaacaggcgcagaattgaatttggtttt gagccttgttcagtagaaaacaaacagaagaaatcaaatgttcctcagtcgttggcaact cacaattcttgtcctgctatggataagagattacaaatttcttgtttactctgcagaagc cctttaggccgccctgaaaatcatctgtatctcagttgcttgttgactgtgtcatcaaaa gtttacctgttatctcttataaaagagagattcatttgttgttcttcaaatacactaaca accgtaccagttataataactgacatttcatcagttgatccaagactctgcaatagaact cttgaaggtgacacaggacagggcatttggcatgaagatgatgggtgtgtattcaaaaat gtcttttgccccttctgcagtagccgtaacaattgtcttggtgtgcaaatcaaagcggct gatgaaaacaatgttaagtggctaaagaagatactgcttttcactgattgtgtggaaatt agaaattctgaagcagcagaggacaaggcagcaaaggataaggatttgtcgcaggttgat gcctcaaccatggacaagactgccattttaaattccattgataagtttgcatattcccct aaacagccagacttgggagggtggaggactacaaaatcaaagctaaaactttctaagagg aggggttaa

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