Theobroma cacao (cacao): 18591838
Help
Entry
18591838 CDS
T02994
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
18591838
Enzymes [BR:
tcc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
18591838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
18591838
NCBI-ProteinID:
XP_017981575
UniProt:
A0AB32WR49
LinkDB
All DBs
Position
8:complement(3540451..3543761)
Genome browser
AA seq
627 aa
AA seq
DB search
MDNGNLQVTISKPEGIVTGVSYQGIDNLLEVRNEESDRGYWDLVWSDEGTAGTAGTSYVI
KGSKFRVIVENEEQVEISFTRAWSSSLEGKHVPLNIDKRFIVLRGSSGFYSYAIFEHLKE
WPGFNLPQTRIVFKLRKDKFRYMAVADNRQRRMPLPEDRSPRRSRPLAYPEAALLVHPVE
PEFKGEVDDKYQYSCENKDLYVHGWICSNPPVGWWQITPSNEFRSGGPMKQNLTSHVGPT
NLAMFLSAHYVGEDMVLKFQRGEPWKKVFGPVFIYLNTLIDNDDPLWLWEDAKEQMLTEV
QCWPYNFPASEDFPKSEQRGCVSGRLQVSDRHVSDDYISANGAYVGLAPPGDAGSWQTES
KGYQFWTRADADGYFLISDVRTGDYNLYAWVPGFIGDYKKSAIVTITPGCDLDMGDLVYE
PPRDGRTLWEIGIPDRTAAEFYVPDPDPKYSNKLYVNHPDRFRQYGLWERYADLYPNGDV
VYTVGVSDYRTDWFFAQVTRKKDDDKYKGTAWQIKFKLDNVDQTGTYKLRLALATAHVAE
LQVRINNPDANPPVFTTGVIGHDNTIARHGIHGLYRLYSIDVKGALLIEGENTIFLTQPM
CSSALQGLMYDYIRLEAPPSNNSTNKL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggataatggcaacctccaagtcacaatatcaaaaccagagggaattgtcaccggagtc
agttatcaaggcatcgacaatttgcttgaagttcgtaacgaagaatccgatagagggtac
tgggaccttgtgtggagtgacgaaggaacagcaggaacagcagggacctcttatgtaata
aaaggatcgaaattcagagtgatcgtagaaaatgaggaacaagtggaaatctcattcaca
agagcatggagttcttctttagagggcaagcacgtccctctaaatatagacaaaaggttc
atagtgcttcgcggatcctcgggcttctactcctacgccatctttgagcacttgaaagag
tggcctggtttcaacctgccacaaaccaggatcgtgttcaagcttagaaaggacaagttt
cgctacatggcagtagcggataacaggcaaaggcgcatgcccctaccagaggaccggtct
ccaagaagaagtagacccctcgcttaccctgaagctgccctacttgttcatcccgtggag
ccggagttcaaaggagaggtagatgacaagtatcagtactcctgtgagaacaaagatctt
tacgtccatggatggatatgctccaatccaccagtggggtggtggcaaatcacgccaagc
aatgagttccgatctggcggaccaatgaaacaaaaccttacttctcatgttggtcctaca
aatttagctatgtttcttagtgctcactacgtgggagaggatatggtgctgaagtttcaa
cgtggagaaccatggaagaaagtctttggccccgttttcatttatctcaatactttgatt
gataacgatgatccgctttggctatgggaagatgctaaagaacagatgttgactgaagtc
cagtgttggccgtacaacttcccagcttcagaggattttccgaagtcggagcagcgaggt
tgtgttagtggtcgattacaagtcagtgacaggcatgtcagcgacgactatatatcagca
aacggtgcttatgtgggattggcaccaccaggggatgccggttcatggcaaacagaaagc
aagggttaccaattctggaccagggcagacgcagatggctatttcttgatcagcgatgta
cggactggtgactataatctctatgcttgggtcccaggtttcataggggattacaaaaaa
agtgccatcgttaccataactccaggttgtgatcttgacatgggtgaccttgtctatgaa
cctccaagagatgggcgcacactgtgggaaatcggcatccccgatagaactgctgcagaa
ttctatgttccagatcctgatccaaagtatagcaacaaactatatgtgaaccaccctgac
cggtttaggcaatacggattgtgggaaagatacgcagatctataccctaatggagatgtt
gtttacaccgttggtgttagtgactacagaactgactggttctttgctcaagttaccagg
aagaaagatgatgataagtataaaggaacagcatggcaaatcaagttcaaacttgataac
gtagatcaaactggaacctataaacttcgattagctctagcaaccgcacatgttgcagaa
ttacaagtcaggatcaataacccagacgcaaatcctcctgtgtttacaactggagtaatt
gggcatgacaacaccattgcaaggcatggaattcatggactataccggctctatagcata
gatgtgaagggtgctctgcttattgaaggagaaaataccattttcttgacacagccaatg
tgtagcagcgctttacaggggctcatgtatgattatattcgtttagaagccccaccttct
aacaattccaccaacaaactttga
DBGET
integrated database retrieval system
