Theobroma cacao (cacao): 18591839
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Entry
18591839 CDS
T02994
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
18591839
Enzymes [BR:
tcc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
18591839
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
18591839
NCBI-ProteinID:
XP_007018290
UniProt:
A0AB32UV48
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Position
8:complement(3545538..3549968)
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AA seq
642 aa
AA seq
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MSWPGVQLLIRDHYVVMDNGILQVTISSPDGIVTGIRYNGIDNVLEVQDEEVERGYWDLV
WSKTGSTGTTGTFDVFKGTSFKVVVENEDQVEISFTRTWDFSLEGNVVPLNLDKRFIMLR
NSSGFYSYAIFEHLGEWPPFNLPQVRIVFKLRKDKFHYMAVADNRQRFMPLPDDRLPDRG
QPLATPEAVLLVNPVEPEFRGEVDDKYQYSSENKDLKVHGWISLNPPIGFWQITPSSEFR
SGGPVKQNLTSHVGPYALAMFLSAHYAGEDLVLKLNPGEPWKKVFGPVFLYLNSLWDKDN
VYSLWEDAKDQMQMEVQNWPYSFPASEDFPKSDQRGKACGRLKVQDRYVSYDCIPANGAY
VGLAPPGEVGSWQRECKGYQFWTRSDEDGNFAVENIRAGEYNIYAWVPGFIGDYKYDAVI
NITEGCTTDVGDLIFEPPRDGPTLWEIGIPDRSAAEFYIPDPDPMYINRLYVNHPDRYRQ
YGLWERYADLYPDGDLVFTVGDSDYEKDWFFAQVNRKKEDGTYQGTTWQIKFMLNIVDHT
GTYILRLALATAHLAELQVRINDPKADPPLFTTGQIGHDNTIARHGIHGLYRLYNVDVPG
VQLVEGENIVFLTQAINTDPLQGIMYDYIRLECPPSSSSRKL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtcatggccaggggtgcaactgcttattcgagatcattatgtggtaatggataatgga
atactccaagtgacaatatcgagtcctgacggaattgtcactgggatacgatataatggc
atcgacaatgtgcttgaagttcaagatgaggaagttgaaagagggtactgggatctagtc
tggagtaaaacaggaagtacaggaacaacaggaacatttgatgtgtttaaaggaacaagt
tttaaggttgttgtagaaaatgaggaccaagtagagatctcattcacaagaacatgggat
ttctctcttgagggcaacgttgttcccttaaatttagacaaaaggttcataatgcttcga
aattcttcgggattctattcctacgccatctttgaacacttgggggaatggcctccattc
aatcttccacaagtcagaattgttttcaagctcagaaaagacaaatttcactacatggcc
gtagcagacaacaggcaaagattcatgcccctgcctgatgaccggttaccagacaggggc
caacctctggcaacaccagaagctgtcctgcttgtcaatcctgtggagccagagttcaga
ggagaggtggatgacaagtaccagtactcatccgagaacaaagatctaaaagttcatggg
tggatatccttgaaccccccaattggtttctggcaaattactcccagcagtgaattccgg
tcaggtggacccgtcaaacagaacctgacctcccatgttggcccctatgctcttgcaatg
tttcttagtgctcattatgccggagaggatttggtgctgaagctgaacccaggagagccg
tggaaaaaggttttcggcccagtttttttgtatctgaattctctctgggataaggacaat
gtatattccctttgggaggatgctaaagaccagatgcagatggaagtccagaactggccc
tacagttttccagcatcagaggattttccaaaatcagaccagcggggcaaagcatgcggc
agattaaaagttcaagacaggtatgttagctatgactgcattccggcaaacggtgcttat
gtgggcttggcaccaccaggagaggtcggatcatggcaaagagaatgcaagggttaccaa
ttctggaccagatcagatgaagatggcaactttgcagtcgagaatataagggctggtgaa
tataatatttatgcatgggtccctggtttcatcggagattacaaatatgatgctgtcatt
aacattacagaaggttgtaccactgacgtgggtgatctgatatttgagcctccaagagat
ggtcctacattatgggaaataggcatacctgatcgctctgcagcagagttttacatccct
gaccctgaccctatgtacattaacagactttatgtcaaccatcctgacaggtatagacag
tatgggttgtgggaaagatatgctgatctatatccagatggagacttggttttcacagtt
ggcgatagtgactacgaaaaagattggttctttgctcaagttaacaggaagaaagaagat
ggtacatatcaaggaactacatggcaaatcaagttcatgctcaatattgtagatcatact
ggaacttatatattgcgattggccctagcaactgcacatcttgctgaattgcaggttcgg
atcaatgatccaaaagcagaccctcctctgttcacaactggacaaattgggcatgacaac
acaatcgcaaggcatggaattcatgggctctaccggctttacaacgtagatgtgccggga
gttcagcttgtggaaggggaaaatatcgtttttctgacacaagcaataaacactgatcca
cttcagggtatcatgtatgactatataaggctagaatgtcccccttctagttccagcaga
aagctttga
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