Theobroma cacao (cacao): 18591840
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Entry
18591840 CDS
T02994
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
18591840
Enzymes [BR:
tcc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
18591840
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
EMC7_beta-sandw
BsuPI
Motif
Other DBs
NCBI-GeneID:
18591840
NCBI-ProteinID:
XP_017981488
UniProt:
A0AB32WPY1
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Position
8:complement(3550674..3555257)
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AA seq
645 aa
AA seq
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MSSRGVQLDVQDKYVVMDNDILQVTISNPGGIVTGLQYNGIDNLLAVENDETDRGYWDLV
WNLAGRKGTKGKFDRIEATSFNVIVENEEQVELSFTRMWDSSLEGRVVPLNIDKRFVMLR
NSSGFYTYAIYEHLEEWPAFILDRLRVAFKLRKDKFHYMAMADNRQRCMPLPDDRLPYRS
QTLAYPEAVLLVDPLEPEFRGEVDDKYQYSCENKDNRVHGWICTDPPVPVGFWQITPSDE
FRSAGPLKQNLTSHVGPTTLAVMHSVHYSGEDLLLKFGTNEPWKKVFGPIFIYLNSLSNG
GDPLSLWEDAKEQMTIEVQGWPYSFPVSEDFPQSDQRGNVSGRLLVKDRYVHDDNIPANG
AYVGLAPPGDVGSWQREVKGYQFWTKTDEDGYFCINNIRTGDYNLYAWVPGFIGDYRYDV
IITPTAGYDIYMGDLVYEPPRDGPTLWEIGIPDRTAAEFYVPDPSPVYINKLYVNHQDRF
RQYGLWERYAELYPDGDLVYTVGVSDYTKDWFFAQVTRKKDDNTYQGTTWQIKFKLDCVD
ESGTYKLRLALASAHASELQVRVNDPDAISPLFSSGQIGKDNTIARHGIHGLYWLYNVDI
PGNLLHEGDNTIFLTQSKSTSPFQGIMYDYIRLEGPPSSDANKRP
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcggggagtgcagttagatgtccaagataaatatgtggtgatggataatgac
atactgcaggtgacaatatcaaacccgggtgggattgttaccggtttgcaatataatggc
atcgacaatttgcttgctgttgaaaacgatgaaactgatagagggtattgggaccttgtc
tggaatctagcaggaaggaaaggaacaaagggtaaatttgacaggattgaagcaacaagc
tttaatgtaatagtggaaaatgaggagcaggtggagctctcatttactagaatgtgggat
tcttcccttgaaggcagagtcgttcccttgaatattgacaagaggtttgtaatgcttcgt
aattcctcaggattctatacctatgcaatttacgagcacttggaggaatggcctgctttc
atccttgacaggctcagggtcgcattcaagctcaggaaagacaagtttcattacatggct
atggcagacaacaggcaaagatgcatgcccctgcctgatgaccggttaccatacagaagc
caaaccctggcctatcccgaggcagtcctactcgttgatccactggaaccggagtttaga
ggagaggtagatgacaagtaccaatactcatgtgagaacaaggacaacagggtccatggt
tggatttgcactgacccccccgtccccgtggggttctggcaaataacacccagcgatgag
tttcgatctgctggccccctcaagcaaaaccttacctcacatgtcggccccaccaccctt
gctgttatgcacagcgttcattattcaggagaggatttgttattgaaatttggaactaat
gagccctggaagaaagtttttggccctatttttatttaccttaattctttgtccaatgga
ggtgacccactttcactttgggaggatgctaaagaacagatgacaatagaagtacaaggc
tggccttacagtttccctgtttctgaagactttccacagtctgatcaaaggggcaatgtc
agtggtagattattagtgaaagatagatatgttcacgatgacaacatacctgccaatggt
gcttatgtgggcttagcacctccaggagatgttggatcttggcaaagagaagtcaagggt
tatcaattctggaccaaaactgatgaagatggctatttctgcattaataatattcggacc
ggagactataatctatacgcatgggtccctggcttcattggagattatcgatacgatgtt
atcattacaccaactgcaggctatgatatttatatgggtgatcttgtatatgagcctcca
agagatggccctacattgtgggaaataggaatcccagatcgcactgctgcagaattctat
gtccctgatcctagtccagtatatatcaacaagttatatgttaatcaccaagacagattt
aggcagtatggattatgggaaagatatgcagagttatatcctgatggagatttggtctac
acagttggcgttagtgactatacaaaagactggttttttgcgcaggttaccagaaagaaa
gatgataatacataccaaggaactacatggcaaatcaagttcaaactagactgtgtagat
gagagcggaacatacaaactgcgattggcattggcttctgcacatgcttctgaacttcag
gtacgggtcaatgatcctgatgcaatttctcctctgttttcgagtggtcaaattggcaag
gacaacacaattgcgagacatggaattcatgggctctactggctgtacaatgtggatatt
ccaggaaatctgctccatgaaggagataataccatttttctaacgcaatcaaaaagcact
agccctttccagggaattatgtatgactatattcgtctagaaggccctccatcttctgac
gccaacaagagaccttag
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