Theobroma cacao (cacao): 18591841
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Entry
18591841 CDS
T02994
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
18591841
Enzymes [BR:
tcc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
18591841
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
CarbopepD_reg_2
NOMO1-like_2nd
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
18591841
NCBI-ProteinID:
XP_017981487
UniProt:
A0AB32WQB4
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Position
8:complement(3561579..3567461)
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AA seq
675 aa
AA seq
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MTSTLQRIIDFFSGCGGCNKRNRNERQDILNMNQDTACAPMPPQGVRLHIQDRYVVMDNG
ICQVTLSKPGGIVTGIRYNGIDNLLEVRNKETNRGYWDLHWNEIGGKGIFDVIQGTSFSV
IVENEEQVELSFTRAWDPSLEGKYIPLNIDKRFIMLRGSSGFYSYAIYEHFKEWPGFELG
ETRITFKLRKEKFQYMAIADNRQRYMPFPDDRSTGRCQPLAYPEAVLFVNPMDQRLTGEV
DDKYQYSCENKDLRVHGWICFDPPVGFWQITPSDEFRSGGPLKQNLTSHVGPTTLAMFLS
AHYAGKYMVPRFEAGEPWKKVFGPVFIYLNSAAHGYDPLWLWEDAKIKMMVEVQSWPYSF
PASEDFLNTEQRGNVNGRLLVQDRYISNDYLTASGAYVGLAPRGNAGSWQMESKNYQFWT
KADQNGFFSIRNIRPGDYNLYAWVPGFIGDYRNEVVITISSGCNIEMGDIIYEPPRDGPT
LWEIGIPDRSAAEFHVPDPDPKYINRLFVNHPDRFRQYGLWERYAELYPDGDLVYTIGAS
DYRKDWFFAQVVRKTSDNSYQGTTWQIKFKLDNVDQSGTYKLRVALASATLAELQVRVND
PNTNRPLFTTGLIGRDNAIARHGIHGIYMLYNVDIPGTRLVKGDNTIFLKQPRCNGPFQG
FMYDYIRLEGPPTSC
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcacactgcagaggatcatagattttttcagtggctgtggcggctgtaacaaa
cgtaacagaaatgaaaggcaagatatattgaacatgaatcaggatacagcttgtgctccc
atgccacctcaaggggtccgattgcatattcaagaccgttatgtggtgatggataatggc
atatgtcaagtcacattatcaaagcctgggggcattgttactggtatacggtataatggc
atagacaatttgcttgaggttcgaaacaaggaaactaatagagggtactgggacctgcac
tggaatgaaataggagggaagggaatatttgatgtaattcaagggacgagttttagtgtc
atagtggaaaatgaggaacaagttgagctctcgttcacaagagcttgggatccctctctc
gagggcaagtacattcccctaaatattgataaaaggtttataatgcttcgtggttcatca
ggcttctactcctatgccatttatgagcatttcaaggaatggcctggttttgagcttgga
gaaaccagaattactttcaagctcagaaaagagaagtttcaatacatggccatagcagat
aacaggcaaagatacatgcccttccctgatgaccgatcaactggaagatgccaacctttg
gcttatccggaagcagttctttttgtcaatcccatggatcagaggctaacaggagaggtg
gatgacaagtaccagtattcatgtgagaacaaagatcttcgggtccatggttggatctgc
tttgacccacctgtggggttctggcaaatcacacctagtgatgagttcagatctggtgga
ccccttaaacagaatttaacctcacatgtaggacccaccactctggctatgtttcttagt
gcacattatgctgggaaatacatggttccacgatttgaagctggtgaaccatggaagaaa
gtttttggccctgttttcatctatcttaattctgcagctcacggatatgacccactttgg
ctgtgggaggatgctaaaatcaagatgatggttgaagttcaaagctggccatatagtttc
cctgcttcagaggattttctaaatacagaacaacggggcaatgttaatggtagactttta
gtccaagacagatatatcagcaatgactatctaacagcaagtggggcatacgttggcttg
gcccctcgaggaaacgcaggatcatggcaaatggaaagcaagaactaccaattctggacc
aaggcagatcagaatggctttttctccattagaaatatacgccctggtgattataatctt
tatgcatgggtccctgggtttattggagattatcggaatgaagttgtcattaccataagc
tcaggttgtaacattgaaatgggtgatatcatatatgaacctccaagagatggaccaaca
ttgtgggaaataggcatccctgatcgctctgctgcagagtttcatgttccagatcctgat
ccaaagtatatcaatagactttttgttaaccatcctgacaggtttaggcagtacgggttg
tgggagagatatgcagaattatatcctgatggagacttggtttacacaattggtgctagt
gactataggaaagattggttctttgcgcaggttgtcaggaagacgagtgataattcatat
caaggaactacatggcaaatcaagttcaaactcgataatgtggatcagagtggtacctac
aaattgcgagtggcacttgcatctgctactctagctgaattgcaggttcgggttaacgat
ccaaatacaaatcgtccgttatttacaactggactgatagggagggacaatgcaatagca
agacatggaattcatgggatctacatgctgtacaatgtggacataccaggtactcggctt
gttaaaggggataacaccatcttcttgaaacaaccaagatgcaatggccctttccaagga
ttcatgtatgactacattcgtttagaaggtcccccaacatcatgttaa
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