Theobroma cacao (cacao): 18591938 Help Entry 18591938          CDS       T02994                                  Name (RefSeq) pre-mRNA-processing protein 40A   KO K12821   pre-mRNA-processing factor 40 Organism tcc  Theobroma cacao (cacao) Pathway tcc03040   Spliceosome Brite KEGG Orthology (KO) [BR:tcc00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     18591938  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:tcc03041]     18591938 Spliceosome [BR:tcc03041]  Complex A   U1 snRNP components    U1 related factors     18591938  Complex B     18591938 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  FF WW WW_TCERG1 FF_RHG35_4th Motif Other DBs NCBI-GeneID:  18591938 NCBI-ProteinID:  XP_007018437 UniProt:  A0AB32WTE9 LinkDB All DBs Position 8:4148241..4158920 Genome browser AA seq 1032 aa AA seqDB search MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFVPAASQQFRPVGQV PSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQSH QTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHAPVAPVAGQ PWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANAPILTPPSASDWQEHTSADGRRYYYN KKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLARE QAQVVASQGAPSDTGVASQAPVAGAVSSAEMPAAAIPVSSNTSQASSPVSVTPVAAVANP SPTLVSGSTVVPVSQSAATNASEVQSPAVAVTPLPAVSSGGSTTPVTSVNANTTMIRSLE STASQDSVHFTNGASAQDIEEAKKGMATAGKVNVTPVEEKVPDDEPLVYANKQEAKNAFK SLLESANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRQK KAREEFTKMLEESKELTSSMRWSKAQSLFENDERFKAVERARDREDLFENYIVELERKER ENAAEEKRRNIAEYRKFLESCDFIKANSQWRKVQDRLEDDERCSRLEKIDRLVMFQDYIH DLEKEEEEKKKMQKEQLRRAERKNRDAFRKLMDEHVVDGTLTAKTYWRDYCLKVKDLPPY LAVASNTSGSTPKDLFEDVVEELEKQYQQDKTHIKDAMKSGKISMVSTWTVEDFKAAISE DVGSLPISDINLKLVYEELLKSAKEKEEKEAKKRQRLADDFTKLLHTYKEITASSDWEDS RPLFEESQEYRSIAEESLRREIFEEYIAYLQEKAKEKERKREEEKAKKEKEREEKEKRKE KERKEKEREREREKGKERTKKDETDSENLDISDSHGHKEDKKKEKEKDRKHRKRHQSGGD DGSSDKDDREESKKSRRHGSDRKKSRKHAHSPESDNESRHKKHKRDHRDGSRRNSGYEEL EDGEVGEDGEIQ NT seq 3099 nt NT seq  +upstreamnt  +downstreamnt atggccaacaattctcaaccctctagtgcacagccacattggcctcctgcagttggatcc ttgggtcctcaaagttatggttctcctttatcttcacagttccgaccagtcgtcccaatg cagcaaggtcagcactttgttccagctgcttcccaacagtttcggcctgttgggcaggtt ccctcttcaaatgttgggatgccagctgttcaaaatcagcagatgcagttttctcagcca atgcagcagtttccaccacggccaaatcaacctggtctttctgcaccttcagcacagcct atgcatgtaccatttggtcaaacaaacaggccacttacatctggatcaccacagtcacat caaactgctccccctttgaatagtcatatgccaggcttaggggcccctggaatgcccccc tcttcatcatatagttatgtgccatcttcttttggccagccacagaacaatgtcagtgca tcgtcccagtttcagcctacatctcaagtgcatgcacctgttgctcctgtggctggacaa ccttggttgtcatctggaaatcagagtgtttcacttgctataccaatacagcagactggc caacaacctccactcatttcttctgcagatacagctgccaatgctcctattcttactccg ccatcagcttctgattggcaagagcatacatctgctgatggaagaagatactattacaac aaaaagacgaggcaatctagttgggaaaagcctctggaactgatgacaccaatagagaga gctgatgcgtccactgtttggaaggaatttacaactccagagggaagaaagtattattat aacaaggttacaaagcaatctaagtggacaatacctgaggaattgaagttagctcgtgag caagctcaggtagtagctagccaaggagccccatcagatacaggagtggcttctcaagcg ccagttgctggtgctgtctcctcagctgagatgcctgctgcagctattcctgtgagctcc aacacttcgcaggcttcaagcccagtatcagttacgcctgttgctgctgttgctaatcct tcccctactttagtatctggatcaacagttgttcctgtttcacaatctgctgcaacgaat gcatctgaggttcaatcacctgcagttgctgttacccccttacctgctgtttcctccgga ggttctactactcctgttacttcggtcaatgctaacacaacaatgataagaagcttggaa agtacagcatctcaagattctgtgcatttcacaaatggagcttctgctcaggacattgag gaagcaaaaaaggggatggcaacggctggaaaggttaatgtgactccagtggaagagaaa gttccggatgatgagcctttagtatatgcaaataagcaggaagcaaaaaatgctttcaaa tccctccttgaatccgcaaatgtgcaatctgattggacttgggagcagacaatgagagaa ataattaatgacaaaaggtatggtgctttgaagacacttggggagcggaagcaagccttt aatgagtatttgggtcaaaggaaaaagctagaggctgaggaaaggcgcatgagacagaag aaagctcgggaggaattcacaaagatgcttgaagagtccaaggaactcacatcatccatg agatggagcaaagctcaaagtttatttgaaaatgatgaaagattcaaggctgttgaacga gccagagaccgggaagatctttttgaaaattatatagtggaacttgagagaaaggaaagg gaaaatgctgcagaggaaaaaaggcggaatatagcagaatacaggaaatttctggaatcc tgtgattttattaaggcaaacagccagtggcggaaagttcaagaccgcttagaggatgat gaaagatgctcacgtcttgaaaaaattgatcgcttggtcatgttccaggactacattcat gacttggagaaggaagaagaggaaaaaaagaagatgcaaaaggaacaattgagacgtgcc gagcgcaaaaaccgtgacgcattccgtaagcttatggacgaacatgttgttgatggcact cttacggctaaaacttactggcgggattattgtttgaaggtgaaagatctgcccccatat cttgctgttgcatcaaacacatctggttcaacaccaaaagatttgtttgaggatgttgtt gaagaattagaaaaacagtatcagcaagacaaaacccatattaaagatgcaatgaagtca gggaagatttccatggtttccacatggacagttgaagacttcaaagctgctatttcagaa gatgttggttccttgccaatatcagatataaacttaaagcttgtgtatgaggagttactc aagagcgccaaggagaaggaggagaaagaggctaagaaacgtcagcgtctagcagatgac ttcactaagctattacatacatataaggagataactgcatcctctgattgggaggattcc agaccactttttgaagaaagccaagaatacagatcaattgcggaagagagtttaaggaga gagatcttcgaggaatacattgcatacttacaggaaaaagctaaagaaaaggagcgcaag cgtgaggaggaaaaggccaaaaaggagaaagagcgagaagagaaagagaaacgaaaggag aaggagagaaaggagaaggaaagagaacgtgaaagggaaaagggtaaggagcgaactaaa aaagatgaaacagatagtgagaatttagatatatctgacagtcatggccataaagaggac aagaaaaaggaaaaagaaaaagataggaaacaccgcaaacgacatcaaagtggtggtgat gatgggagttccgataaggatgatagggaggagtctaagaagtctcgcagacacggcagt gaccgtaagaaatcaagaaagcatgcgcactcacctgaatctgacaatgaaagccggcat aaaaagcacaagagagatcaccgcgatggatcgcgtagaaacagtggttatgaggagctg gaagatggtgaagttggtgaggacggtgaaattcagtag

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